Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm16171-201ENSMUST00000118004 324 ntBASIC3□□□□□ -1.93
Col11a1Q61245 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col11a1Q61245 Gm26187-201ENSMUST00000157693 101 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3□□□□□ -1.93
Col11a1Q61245 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col11a1Q61245 Gm27959-201ENSMUST00000185172 111 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3□□□□□ -1.93
Col11a1Q61245 Gm2676-201ENSMUST00000207279 606 ntBASIC3□□□□□ -1.93
Col11a1Q61245 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col11a1Q61245 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3□□□□□ -1.93
Col11a1Q61245 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3□□□□□ -1.93
Col11a1Q61245 Gm46996-201ENSMUST00000220924 408 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col11a1Q61245 Snora23-201ENSMUST00000082517 184 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm25699-201ENSMUST00000082896 167 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm23847-201ENSMUST00000083829 110 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm3623-201ENSMUST00000173643 2747 ntBASIC3□□□□□ -1.93
Col11a1Q61245 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col11a1Q61245 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col11a1Q61245 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col11a1Q61245 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Col11a1Q61245 Gm25377-201ENSMUST00000104334 129 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm15974-201ENSMUST00000159103 531 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3□□□□□ -1.93
Col11a1Q61245 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm18558-201ENSMUST00000186253 1214 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm28149-201ENSMUST00000187102 378 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm28768-201ENSMUST00000189034 378 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm18026-201ENSMUST00000222789 727 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col11a1Q61245 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col11a1Q61245 Gm25130-201ENSMUST00000082650 156 ntBASIC3□□□□□ -1.93
Col11a1Q61245 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3□□□□□ -1.93
Col11a1Q61245 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.99□□□□□ -1.93
Col11a1Q61245 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm24532-201ENSMUST00000157951 286 ntBASIC2.99□□□□□ -1.93
Col11a1Q61245 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm22264-201ENSMUST00000178200 107 ntBASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm43393-201ENSMUST00000200147 194 ntBASIC2.99□□□□□ -1.93
Col11a1Q61245 Gm43384-201ENSMUST00000200569 637 ntBASIC2.99□□□□□ -1.93
Col11a1Q61245 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col11a1Q61245 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Col11a1Q61245 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm15074-201ENSMUST00000117603 936 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm23889-201ENSMUST00000122689 104 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm24210-201ENSMUST00000158263 133 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm14527-201ENSMUST00000179300 639 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col11a1Q61245 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col11a1Q61245 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Col11a1Q61245 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Col11a1Q61245 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col11a1Q61245 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col11a1Q61245 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm37989-201ENSMUST00000195202 803 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm25820-201ENSMUST00000198589 127 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.98□□□□□ -1.93
Col11a1Q61245 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.98□□□□□ -1.93
Col11a1Q61245 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Gm14448-201ENSMUST00000116383 210 ntBASIC2.97□□□□□ -1.93
Col11a1Q61245 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Col11a1Q61245 Gm23048-201ENSMUST00000157237 129 ntBASIC2.97□□□□□ -1.93
Col11a1Q61245 Gm8580-201ENSMUST00000160295 464 ntBASIC2.97□□□□□ -1.93
Col11a1Q61245 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Gm27786-201ENSMUST00000184337 70 ntBASIC2.97□□□□□ -1.93
Col11a1Q61245 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.97□□□□□ -1.93
Col11a1Q61245 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.97□□□□□ -1.93
Col11a1Q61245 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.97□□□□□ -1.93
Col11a1Q61245 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col11a1Q61245 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col11a1Q61245 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Col11a1Q61245 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm13880-201ENSMUST00000118421 474 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col11a1Q61245 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms