Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Mir466i-201ENSMUST00000116924 121 ntBASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm24291-201ENSMUST00000157633 162 ntBASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm20660-201ENSMUST00000177515 289 ntBASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm37837-201ENSMUST00000191743 604 ntBASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm43384-201ENSMUST00000200569 637 ntBASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm44817-201ENSMUST00000205416 453 ntBASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm23766-201ENSMUST00000103894 80 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm26015-201ENSMUST00000104402 125 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm23803-201ENSMUST00000104610 132 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm14971-201ENSMUST00000117980 663 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm12731-201ENSMUST00000120932 268 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm23268-201ENSMUST00000175494 78 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm43393-201ENSMUST00000200147 194 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm34314-201ENSMUST00000203622 367 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm7422-201ENSMUST00000220115 640 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm15421-202ENSMUST00000118224 399 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm9078-201ENSMUST00000119126 617 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm7582-201ENSMUST00000160831 603 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm25470-201ENSMUST00000175576 111 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm37377-201ENSMUST00000191733 304 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm38334-201ENSMUST00000195060 313 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc88aQ5SNZ0 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.28□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm13743-201ENSMUST00000121486 724 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm24443-201ENSMUST00000157242 132 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm16584-201ENSMUST00000159267 189 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm25360-201ENSMUST00000178786 191 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Mir378a-201ENSMUST00000198300 66 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm44844-201ENSMUST00000207242 336 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Snora23-201ENSMUST00000082517 184 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.27□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm8880-201ENSMUST00000121800 454 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm14578-201ENSMUST00000122166 391 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm23385-201ENSMUST00000158592 295 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm8649-201ENSMUST00000181799 233 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm37946-201ENSMUST00000192064 347 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm24919-201ENSMUST00000083020 106 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm13687-201ENSMUST00000119857 282 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm22073-201ENSMUST00000122668 189 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm15733-201ENSMUST00000132957 242 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm20450-201ENSMUST00000173652 147 ntBASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.26□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm27369-201ENSMUST00000185182 71 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms