Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15854-201ENSMUST00000118879 808 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm7327-201ENSMUST00000120925 652 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15780-201ENSMUST00000121283 935 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm11446-201ENSMUST00000121319 866 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15986-201ENSMUST00000122153 400 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15733-201ENSMUST00000132957 242 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm24691-201ENSMUST00000157762 140 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm3851-201ENSMUST00000168653 318 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Mir3106-201ENSMUST00000175401 82 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm6501-201ENSMUST00000187178 916 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28872-201ENSMUST00000191518 158 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm44690-201ENSMUST00000207984 382 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm38375-201ENSMUST00000194610 2227 ntBASIC2.32□□□□□ -2.04
Trav6d-4Q5R1I0 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm24671-201ENSMUST00000104159 158 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm14927-201ENSMUST00000120283 454 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm13511-201ENSMUST00000121167 363 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm23183-201ENSMUST00000122595 323 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm23716-201ENSMUST00000157348 144 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm16490-201ENSMUST00000165299 351 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm27532-201ENSMUST00000183726 113 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm27379-201ENSMUST00000183730 123 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm43494-201ENSMUST00000197672 388 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm43384-201ENSMUST00000200569 637 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm44526-201ENSMUST00000204664 121 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm44223-201ENSMUST00000204854 114 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm20074-201ENSMUST00000208144 484 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6d-4Q5R1I0 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm24240-201ENSMUST00000157785 135 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm22330-201ENSMUST00000158068 115 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm23505-201ENSMUST00000158989 130 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm9587-201ENSMUST00000172449 454 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Mir7081-201ENSMUST00000184490 75 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Mir6401-201ENSMUST00000184499 109 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29576-201ENSMUST00000188020 678 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms