Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm24890-201ENSMUST00000104389 102 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm14577-201ENSMUST00000121134 256 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm14845-201ENSMUST00000121259 306 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm24213-201ENSMUST00000158255 258 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21842-201ENSMUST00000177552 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21626-201ENSMUST00000177791 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21562-201ENSMUST00000177888 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21539-201ENSMUST00000177925 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm17522-201ENSMUST00000178144 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21599-201ENSMUST00000178249 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21914-201ENSMUST00000178452 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21723-201ENSMUST00000178692 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21916-201ENSMUST00000178771 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21801-201ENSMUST00000178865 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21633-201ENSMUST00000178941 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21821-201ENSMUST00000179646 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21588-201ENSMUST00000180074 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21780-201ENSMUST00000180128 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21572-201ENSMUST00000180134 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm21529-201ENSMUST00000180175 498 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm29370-202ENSMUST00000187476 499 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm28196-201ENSMUST00000187719 640 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm45078-201ENSMUST00000205343 546 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm18602-201ENSMUST00000209794 851 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.3□□□□□ -1.88
Upf3bQ3ULL6 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm15382-201ENSMUST00000118011 537 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm23716-201ENSMUST00000157348 144 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm25598-201ENSMUST00000179031 107 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm28314-201ENSMUST00000191276 345 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm17967-201ENSMUST00000195319 647 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm18384-201ENSMUST00000195974 808 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm44594-201ENSMUST00000208982 407 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm23460-201ENSMUST00000083258 109 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Olfr203-201ENSMUST00000089305 924 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm8074-201ENSMUST00000095071 252 ntBASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3bQ3ULL6 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm24273-201ENSMUST00000102332 164 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm13803-201ENSMUST00000117547 489 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm16383-201ENSMUST00000118122 232 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm13080-201ENSMUST00000120556 420 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm23792-201ENSMUST00000122557 93 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm16274-201ENSMUST00000139251 592 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Mir1264-201ENSMUST00000175381 86 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm26297-201ENSMUST00000179464 132 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm7870-201ENSMUST00000184467 616 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms