Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Upf3aQ3ULJ3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Upf3aQ3ULJ3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm26423-201ENSMUST00000104277 128 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm15161-201ENSMUST00000117340 387 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm11387-201ENSMUST00000120266 772 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm16021-201ENSMUST00000121176 219 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm24002-201ENSMUST00000158456 104 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm24019-201ENSMUST00000178620 107 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm26243-201ENSMUST00000179260 107 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Mir6916-201ENSMUST00000184514 63 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm29513-201ENSMUST00000185741 202 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm28282-201ENSMUST00000186072 186 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm43345-201ENSMUST00000199484 269 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm43232-201ENSMUST00000201346 364 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm44137-201ENSMUST00000203670 367 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm6064-201ENSMUST00000203999 454 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm44656-201ENSMUST00000208428 490 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm8423-201ENSMUST00000211387 607 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm22245-201ENSMUST00000082479 103 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm23296-201ENSMUST00000082555 107 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm24859-201ENSMUST00000082729 107 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Upf3aQ3ULJ3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Upf3aQ3ULJ3 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Upf3aQ3ULJ3 Gm22936-201ENSMUST00000103955 126 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm12568-201ENSMUST00000117362 624 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm13379-201ENSMUST00000118053 621 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm7071-201ENSMUST00000120458 462 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm25898-201ENSMUST00000158303 106 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm18520-201ENSMUST00000174783 658 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm23402-201ENSMUST00000178130 107 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm5527-201ENSMUST00000179821 642 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Mir6917-201ENSMUST00000184111 61 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm5731-201ENSMUST00000190969 481 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm44016-201ENSMUST00000203463 164 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm45400-201ENSMUST00000211603 653 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm26176-201ENSMUST00000083795 105 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.4□□□□□ -1.87
Upf3aQ3ULJ3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm11797-201ENSMUST00000121336 754 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm22187-201ENSMUST00000157819 129 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm22538-201ENSMUST00000158169 299 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Mir1264-201ENSMUST00000175381 86 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.39□□□□□ -1.87
Upf3aQ3ULJ3 Gm18505-201ENSMUST00000187360 790 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms