Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm17030-201ENSMUST00000167016 393 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm20526-201ENSMUST00000173416 158 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm24811-201ENSMUST00000175313 100 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm18185-201ENSMUST00000186725 667 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm29408-201ENSMUST00000187536 216 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm37495-201ENSMUST00000194590 264 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm25200-201ENSMUST00000083094 130 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.35□□□□□ -1.87
Ssbp4Q3U4B1 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm26075-201ENSMUST00000104062 121 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm24608-201ENSMUST00000104381 136 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm22771-201ENSMUST00000104449 91 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm6429-201ENSMUST00000117144 475 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm6587-201ENSMUST00000120219 613 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm14927-201ENSMUST00000120283 454 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm26276-201ENSMUST00000157099 109 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm24965-201ENSMUST00000157922 106 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm23352-201ENSMUST00000158428 64 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm3851-201ENSMUST00000168653 318 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm7094-201ENSMUST00000178379 366 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm23186-201ENSMUST00000180078 107 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm27535-201ENSMUST00000183814 157 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm7870-201ENSMUST00000184467 616 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm28414-201ENSMUST00000190111 294 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm43070-201ENSMUST00000196938 415 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm44349-201ENSMUST00000197048 123 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm43494-201ENSMUST00000197672 388 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm43431-201ENSMUST00000198577 340 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm8774-201ENSMUST00000203621 692 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm18507-201ENSMUST00000218855 525 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm25592-201ENSMUST00000082635 131 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm23518-201ENSMUST00000082835 153 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm25699-201ENSMUST00000082896 167 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ssbp4Q3U4B1 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ssbp4Q3U4B1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ssbp4Q3U4B1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ssbp4Q3U4B1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ssbp4Q3U4B1 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.33□□□□□ -1.88
Ssbp4Q3U4B1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms