Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm12370-201ENSMUST00000117809 604 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm13550-201ENSMUST00000118185 525 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm14793-201ENSMUST00000118739 311 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm7071-201ENSMUST00000120458 462 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm23024-201ENSMUST00000158770 292 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm21815-201ENSMUST00000178213 664 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm28304-201ENSMUST00000185977 312 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm29256-201ENSMUST00000189094 312 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm28484-201ENSMUST00000190606 312 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm29475-201ENSMUST00000190767 312 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm45366-201ENSMUST00000209828 384 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm46234-201ENSMUST00000218702 259 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm19441-201ENSMUST00000221545 330 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 AC159256.1-201ENSMUST00000224298 1039 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm22810-201ENSMUST00000082741 158 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm7381-201ENSMUST00000098958 300 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm3940-201ENSMUST00000105087 432 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm14670-201ENSMUST00000117327 337 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm12016-201ENSMUST00000119079 681 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm15113-201ENSMUST00000119280 836 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm15899-201ENSMUST00000128586 238 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm23960-201ENSMUST00000157206 131 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm16318-201ENSMUST00000162402 601 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm26219-201ENSMUST00000175216 71 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm13249-201ENSMUST00000177803 345 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm23568-201ENSMUST00000177960 92 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm24829-201ENSMUST00000179245 92 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm13144-201ENSMUST00000179385 345 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm27636-201ENSMUST00000184528 122 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm28094-201ENSMUST00000185262 390 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm28974-201ENSMUST00000187893 231 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm22364-201ENSMUST00000083097 98 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Gm25512-201ENSMUST00000083863 107 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col28a1Q2UY11 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm14050-201ENSMUST00000117052 346 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm11322-201ENSMUST00000118095 435 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm13349-201ENSMUST00000118436 411 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms