Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 Gm37966-201ENSMUST00000193122 326 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC5.81□□□□□ -1.48
Col9a1Q05722 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.81□□□□□ -1.48
Col9a1Q05722 AC157476.1-201ENSMUST00000215555 169 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 Gm38265-201ENSMUST00000193479 3766 ntBASIC5.81□□□□□ -1.48
Col9a1Q05722 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.81□□□□□ -1.48
Col9a1Q05722 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Col9a1Q05722 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Col9a1Q05722 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col9a1Q05722 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Col9a1Q05722 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Col9a1Q05722 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Col9a1Q05722 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm12062-201ENSMUST00000117533 259 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm23466-201ENSMUST00000157133 106 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm25913-201ENSMUST00000157617 135 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm21999-201ENSMUST00000165985 387 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm19901-201ENSMUST00000192191 495 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col9a1Q05722 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm18628-201ENSMUST00000220584 475 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm2614-201ENSMUST00000223227 403 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm36944-201ENSMUST00000192257 2759 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.8□□□□□ -1.48
Col9a1Q05722 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.8□□□□□ -1.48
Col9a1Q05722 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col9a1Q05722 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm26500-201ENSMUST00000101867 106 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm23193-201ENSMUST00000102427 82 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm15313-201ENSMUST00000119179 282 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Defa-ps8-201ENSMUST00000120972 279 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm22217-201ENSMUST00000157556 313 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm16162-201ENSMUST00000162296 297 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm24081-201ENSMUST00000175177 125 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC5.79□□□□□ -1.48
Col9a1Q05722 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms