Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm38011-201ENSMUST00000193312 279 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm32447-201ENSMUST00000194265 697 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm36382-201ENSMUST00000198892 541 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm43604-201ENSMUST00000199799 705 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm44523-201ENSMUST00000205616 417 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a1Q04857 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Snord68-201ENSMUST00000082516 86 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Snora52-201ENSMUST00000082732 137 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Mir147-201ENSMUST00000102354 79 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm24338-201ENSMUST00000104205 127 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm12245-201ENSMUST00000117266 357 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm7164-201ENSMUST00000117503 450 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm22791-201ENSMUST00000157232 145 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm22336-201ENSMUST00000157719 107 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm24961-201ENSMUST00000157918 184 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm24499-201ENSMUST00000158446 104 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm22326-201ENSMUST00000158897 351 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Mir3066-201ENSMUST00000175296 83 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Mir7022-201ENSMUST00000183749 61 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm10292-202ENSMUST00000193165 585 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm37030-201ENSMUST00000194254 295 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm37659-201ENSMUST00000194574 111 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Gm43440-201ENSMUST00000201957 729 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Col6a1Q04857 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.36□□□□□ -1.55
Col6a1Q04857 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.36□□□□□ -1.55
Col6a1Q04857 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a1Q04857 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col6a1Q04857 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col6a1Q04857 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm12235-201ENSMUST00000118596 170 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm12379-201ENSMUST00000119607 391 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm13717-201ENSMUST00000119868 365 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm15796-201ENSMUST00000162135 204 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm44402-201ENSMUST00000203677 238 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm8249-201ENSMUST00000219225 465 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm22829-201ENSMUST00000083771 106 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms