Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.72□□□□□ -1.65
SgcbP82349 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.72□□□□□ -1.65
SgcbP82349 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SgcbP82349 Gm26446-201ENSMUST00000082455 103 ntBASIC4.72□□□□□ -1.65
SgcbP82349 Mir496a-201ENSMUST00000093627 79 ntBASIC4.72□□□□□ -1.65
SgcbP82349 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SgcbP82349 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SgcbP82349 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SgcbP82349 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SgcbP82349 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SgcbP82349 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SgcbP82349 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SgcbP82349 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SgcbP82349 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.72□□□□□ -1.65
SgcbP82349 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SgcbP82349 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.71□□□□□ -1.65
SgcbP82349 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SgcbP82349 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.65
SgcbP82349 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
SgcbP82349 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SgcbP82349 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
SgcbP82349 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SgcbP82349 Gm43682-201ENSMUST00000202150 2090 ntBASIC4.71□□□□□ -1.65
SgcbP82349 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.71□□□□□ -1.66
SgcbP82349 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SgcbP82349 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
SgcbP82349 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.71□□□□□ -1.66
SgcbP82349 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SgcbP82349 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SgcbP82349 Mir711-201ENSMUST00000102188 82 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Gm14008-201ENSMUST00000120483 274 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.71□□□□□ -1.66
SgcbP82349 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SgcbP82349 Gm24914-201ENSMUST00000157285 313 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.71□□□□□ -1.66
SgcbP82349 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SgcbP82349 Gm26701-201ENSMUST00000181571 234 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Mir6903-201ENSMUST00000183597 88 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Mir7006-201ENSMUST00000183624 69 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Mir6412-201ENSMUST00000184477 97 ntBASIC4.71□□□□□ -1.66
SgcbP82349 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.71□□□□□ -1.66
SgcbP82349 Gm7837-201ENSMUST00000190873 412 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Mir6516-201ENSMUST00000196236 110 ntBASIC4.71□□□□□ -1.66
SgcbP82349 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SgcbP82349 Mir337-201ENSMUST00000083592 97 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Gm9386-201ENSMUST00000095195 381 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SgcbP82349 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SgcbP82349 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.71□□□□□ -1.66
SgcbP82349 Smc5-206ENSMUST00000226111 3265 ntBASIC4.71□□□□□ -1.66
SgcbP82349 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.71□□□□□ -1.66
SgcbP82349 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SgcbP82349 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SgcbP82349 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SgcbP82349 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SgcbP82349 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SgcbP82349 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
SgcbP82349 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SgcbP82349 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SgcbP82349 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SgcbP82349 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
SgcbP82349 Gm24170-201ENSMUST00000104124 133 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm24789-201ENSMUST00000104282 131 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm8595-201ENSMUST00000118250 630 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm17014-201ENSMUST00000120765 168 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm15212-201ENSMUST00000122403 466 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.7□□□□□ -1.66
SgcbP82349 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.7□□□□□ -1.66
SgcbP82349 Mir1963-201ENSMUST00000158594 59 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm7609-204ENSMUST00000161424 461 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SgcbP82349 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SgcbP82349 Gm7958-201ENSMUST00000178255 468 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm10784-201ENSMUST00000178715 238 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm4617-201ENSMUST00000178993 331 ntBASIC4.7□□□□□ -1.66
SgcbP82349 Gm7950-201ENSMUST00000179633 468 ntBASIC4.7□□□□□ -1.66
SgcbP82349 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.7□□□□□ -1.66
SgcbP82349 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.7□□□□□ -1.66
SgcbP82349 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms