Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm23779-201ENSMUST00000157938 64 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm24940-201ENSMUST00000158326 108 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm24819-201ENSMUST00000175094 166 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.49□□□□□ -1.69
Sf3b6P59708 Mir6539-201ENSMUST00000183732 110 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm6543-201ENSMUST00000197353 808 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm9332-201ENSMUST00000198431 730 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm44391-201ENSMUST00000198490 93 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm44419-201ENSMUST00000203338 229 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm43914-201ENSMUST00000203592 594 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm45704-201ENSMUST00000212582 403 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.49□□□□□ -1.69
Sf3b6P59708 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm10237-201ENSMUST00000078393 273 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm26163-201ENSMUST00000083792 178 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.49□□□□□ -1.69
Sf3b6P59708 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sf3b6P59708 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sf3b6P59708 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Sf3b6P59708 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sf3b6P59708 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm23422-201ENSMUST00000102000 107 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm14657-201ENSMUST00000117461 302 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm14013-201ENSMUST00000119006 270 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm12379-201ENSMUST00000119607 391 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm7189-201ENSMUST00000119811 429 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm11481-201ENSMUST00000120069 255 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm13557-201ENSMUST00000120771 382 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm7308-201ENSMUST00000121087 447 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm8061-201ENSMUST00000122380 350 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm5401-201ENSMUST00000122444 365 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm24191-201ENSMUST00000157977 122 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm16114-201ENSMUST00000161930 300 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm19637-201ENSMUST00000185933 579 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm2914-201ENSMUST00000186120 328 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm42621-201ENSMUST00000198114 275 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm38670-201ENSMUST00000199248 77 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Mir691-201ENSMUST00000199719 78 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Mir7227-201ENSMUST00000200408 59 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm20039-201ENSMUST00000210329 394 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm45249-201ENSMUST00000211021 348 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm26446-201ENSMUST00000082455 103 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm26055-201ENSMUST00000083038 107 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm25207-201ENSMUST00000093745 107 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Olfr713-201ENSMUST00000098139 975 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sf3b6P59708 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.48□□□□□ -1.69
Sf3b6P59708 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sf3b6P59708 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sf3b6P59708 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Sf3b6P59708 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Sf3b6P59708 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sf3b6P59708 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sf3b6P59708 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.47□□□□□ -1.69
Sf3b6P59708 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sf3b6P59708 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sf3b6P59708 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms