Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm15994-201ENSMUST00000118029 402 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm14833-201ENSMUST00000118345 1027 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 Gm9440-201ENSMUST00000119667 539 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm7855-201ENSMUST00000137737 687 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 Gm3030-201ENSMUST00000163410 516 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Gm2092-201ENSMUST00000178887 639 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Gm2759-201ENSMUST00000179938 639 ntBASIC3.85□□□□□ -1.79
NcanP55066 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.85□□□□□ -1.79
NcanP55066 Gm28263-201ENSMUST00000185884 400 ntBASIC3.85□□□□□ -1.79
NcanP55066 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 Gm37085-201ENSMUST00000193780 196 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm38080-201ENSMUST00000194035 268 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm37418-201ENSMUST00000195031 274 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm44058-201ENSMUST00000204335 467 ntBASIC3.85□□□□□ -1.79
NcanP55066 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 Gm19599-201ENSMUST00000218898 358 ntBASIC3.85□□□□□ -1.79
NcanP55066 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.85□□□□□ -1.79
NcanP55066 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.85□□□□□ -1.79
NcanP55066 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 Gm23452-201ENSMUST00000083327 107 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NcanP55066 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.85□□□□□ -1.79
NcanP55066 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
NcanP55066 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NcanP55066 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.85□□□□□ -1.79
NcanP55066 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.85□□□□□ -1.79
NcanP55066 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NcanP55066 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.85□□□□□ -1.79
NcanP55066 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.85□□□□□ -1.79
NcanP55066 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NcanP55066 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.84□□□□□ -1.79
NcanP55066 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NcanP55066 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NcanP55066 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.84□□□□□ -1.79
NcanP55066 Gm11843-201ENSMUST00000118984 425 ntBASIC3.84□□□□□ -1.79
NcanP55066 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.84□□□□□ -1.79
NcanP55066 Gm13581-201ENSMUST00000120675 278 ntBASIC3.84□□□□□ -1.79
NcanP55066 Gm25102-201ENSMUST00000122479 112 ntBASIC3.84□□□□□ -1.79
NcanP55066 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.84□□□□□ -1.79
NcanP55066 Gm22968-201ENSMUST00000157955 118 ntBASIC3.84□□□□□ -1.79
NcanP55066 Gm25520-201ENSMUST00000158389 118 ntBASIC3.84□□□□□ -1.79
NcanP55066 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NcanP55066 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NcanP55066 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.84□□□□□ -1.79
NcanP55066 Gm9632-201ENSMUST00000195934 643 ntBASIC3.84□□□□□ -1.79
NcanP55066 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.84□□□□□ -1.79
NcanP55066 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NcanP55066 Gm9973-202ENSMUST00000220926 166 ntBASIC3.84□□□□□ -1.79
NcanP55066 Snord21-201ENSMUST00000082519 94 ntBASIC3.84□□□□□ -1.79
NcanP55066 Snord14e-201ENSMUST00000082857 90 ntBASIC3.84□□□□□ -1.79
NcanP55066 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NcanP55066 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NcanP55066 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.84□□□□□ -1.79
NcanP55066 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NcanP55066 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NcanP55066 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NcanP55066 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.84□□□□□ -1.8
NcanP55066 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
NcanP55066 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
NcanP55066 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.83□□□□□ -1.8
NcanP55066 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NcanP55066 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.83□□□□□ -1.8
NcanP55066 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.83□□□□□ -1.8
NcanP55066 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NcanP55066 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm25414-201ENSMUST00000101814 107 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm23431-201ENSMUST00000104006 107 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm14811-201ENSMUST00000117070 117 ntBASIC3.83□□□□□ -1.8
NcanP55066 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm11363-201ENSMUST00000121672 548 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm14649-201ENSMUST00000121814 324 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm14907-201ENSMUST00000121948 854 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm8840-201ENSMUST00000122454 386 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NcanP55066 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.83□□□□□ -1.8
NcanP55066 Gm26187-201ENSMUST00000157693 101 ntBASIC3.83□□□□□ -1.8
NcanP55066 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.83□□□□□ -1.8
NcanP55066 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NcanP55066 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NcanP55066 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms