Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sox3P53784 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sox3P53784 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.31□□□□□ -1.88
Sox3P53784 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox3P53784 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox3P53784 Gm23702-201ENSMUST00000158840 130 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm3851-201ENSMUST00000168653 318 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm4207-201ENSMUST00000173144 960 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm22908-201ENSMUST00000177620 110 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm27522-201ENSMUST00000183949 230 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm27233-201ENSMUST00000184030 307 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm27733-201ENSMUST00000184803 68 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm28148-201ENSMUST00000186924 697 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm38268-201ENSMUST00000195813 193 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm42438-201ENSMUST00000197832 974 ntBASIC3.31□□□□□ -1.88
Sox3P53784 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sox3P53784 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.31□□□□□ -1.88
Sox3P53784 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Sox3P53784 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Sox3P53784 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.31□□□□□ -1.88
Sox3P53784 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.31□□□□□ -1.88
Sox3P53784 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox3P53784 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox3P53784 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox3P53784 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox3P53784 Gm11869-201ENSMUST00000118701 329 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm14939-201ENSMUST00000120347 680 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm12071-201ENSMUST00000121968 469 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm26020-201ENSMUST00000122729 183 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm23668-201ENSMUST00000157465 111 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm23819-201ENSMUST00000158744 109 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox3P53784 Mir5127-201ENSMUST00000175295 71 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox3P53784 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Sox3P53784 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Sox3P53784 Gm25120-201ENSMUST00000180148 79 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.3□□□□□ -1.88
Sox3P53784 Gm7182-201ENSMUST00000193351 732 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Gm18327-201ENSMUST00000202426 830 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Sox3P53784 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.3□□□□□ -1.88
Sox3P53784 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox3P53784 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Olfr203-201ENSMUST00000089305 924 ntBASIC3.3□□□□□ -1.88
Sox3P53784 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Sox3P53784 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Sox3P53784 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Sox3P53784 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sox3P53784 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.29□□□□□ -1.88
Sox3P53784 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sox3P53784 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sox3P53784 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Sox3P53784 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Sox3P53784 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm16021-201ENSMUST00000121176 219 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm12578-201ENSMUST00000121244 417 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm13743-201ENSMUST00000121486 724 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm12819-201ENSMUST00000122223 629 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm24960-201ENSMUST00000157923 90 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm16101-201ENSMUST00000160695 430 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.29□□□□□ -1.88
Sox3P53784 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sox3P53784 Gm25412-201ENSMUST00000180258 107 ntBASIC3.29□□□□□ -1.88
Sox3P53784 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.29□□□□□ -1.88
Sox3P53784 Gm27952-201ENSMUST00000184748 105 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms