Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Mir6715-201ENSMUST00000184990 57 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm29598-201ENSMUST00000188996 588 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Npn2-202ENSMUST00000189275 235 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm38076-201ENSMUST00000193889 450 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm37836-201ENSMUST00000195875 175 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm43814-201ENSMUST00000197851 413 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm44961-201ENSMUST00000207450 196 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm46327-201ENSMUST00000218240 365 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm5175-202ENSMUST00000219699 529 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Nkx2-1P50220 Snora31-201ENSMUST00000083213 130 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-1P50220 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.24□□□□□ -1.89
Nkx2-1P50220 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm12173-201ENSMUST00000117622 273 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm11923-201ENSMUST00000118135 508 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm15025-201ENSMUST00000118434 418 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm14358-201ENSMUST00000118458 403 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm14688-201ENSMUST00000119169 303 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm15037-201ENSMUST00000120358 259 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm13511-201ENSMUST00000121167 363 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm11891-201ENSMUST00000121241 619 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm15157-201ENSMUST00000121852 702 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm23111-201ENSMUST00000122652 105 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm23957-201ENSMUST00000157209 90 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm22794-201ENSMUST00000157228 306 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm6395-201ENSMUST00000167639 691 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm2930-201ENSMUST00000170403 474 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm26991-201ENSMUST00000180950 620 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm21070-201ENSMUST00000182425 985 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm27414-201ENSMUST00000185033 381 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm28113-201ENSMUST00000188280 229 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm38261-201ENSMUST00000192608 316 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm44343-201ENSMUST00000196702 90 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm43384-201ENSMUST00000200569 637 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm44032-201ENSMUST00000204841 166 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm18672-201ENSMUST00000208035 270 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm7380-201ENSMUST00000211599 466 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm25800-201ENSMUST00000082636 134 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm8074-201ENSMUST00000095071 252 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-1P50220 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.23□□□□□ -1.89
Nkx2-1P50220 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx2-1P50220 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm14915-201ENSMUST00000120747 204 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm7618-201ENSMUST00000121643 171 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm13419-201ENSMUST00000121711 271 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm26194-201ENSMUST00000175036 71 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm8600-201ENSMUST00000186320 905 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm29196-201ENSMUST00000189239 618 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm19224-201ENSMUST00000190477 793 ntBASIC3.22□□□□□ -1.89
Nkx2-1P50220 Gm37878-201ENSMUST00000192108 387 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms