Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm10075-201ENSMUST00000162030 545 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm24080-201ENSMUST00000175178 232 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm23415-201ENSMUST00000175519 83 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm4479-201ENSMUST00000178807 171 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Sdc1P18828 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm29064-201ENSMUST00000187014 813 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm37288-201ENSMUST00000193963 334 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm44099-201ENSMUST00000203299 112 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm7468-201ENSMUST00000203900 652 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm34224-201ENSMUST00000204606 364 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 AC140930.4-201ENSMUST00000220750 150 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Sdc1P18828 n-R5s54-201ENSMUST00000083837 112 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Sdc1P18828 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Sdc1P18828 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Sdc1P18828 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Sdc1P18828 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm12954-201ENSMUST00000118610 611 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm14731-201ENSMUST00000119216 376 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm15026-201ENSMUST00000119219 458 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm24914-201ENSMUST00000157285 313 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm25713-201ENSMUST00000158625 109 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Mir5136-201ENSMUST00000175573 76 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm21756-201ENSMUST00000178380 930 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm21405-201ENSMUST00000179024 930 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm27921-201ENSMUST00000183968 108 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm21191-201ENSMUST00000186484 930 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm29503-201ENSMUST00000191044 930 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm38018-201ENSMUST00000195651 540 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm42465-201ENSMUST00000197036 492 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm43228-201ENSMUST00000200735 264 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm45146-201ENSMUST00000207108 221 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm19126-201ENSMUST00000207896 509 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm45588-201ENSMUST00000211213 630 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm19563-201ENSMUST00000222031 270 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 AC124581.4-201ENSMUST00000225874 463 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc1P18828 Gm22739-201ENSMUST00000083437 160 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm21286-201ENSMUST00000098035 545 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.75□□□□□ -1.97
Sdc1P18828 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Sdc1P18828 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Sdc1P18828 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Sdc1P18828 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm15613-201ENSMUST00000118396 326 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm12268-201ENSMUST00000118398 442 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm12328-201ENSMUST00000118611 197 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms