Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.91□□□□□ -1.94
Cdx1P18111 CT010506.3-201ENSMUST00000223699 410 ntBASIC2.91□□□□□ -1.94
Cdx1P18111 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Cdx1P18111 Gm10704-201ENSMUST00000098952 730 ntBASIC2.91□□□□□ -1.94
Cdx1P18111 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Cdx1P18111 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.91□□□□□ -1.94
Cdx1P18111 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Cdx1P18111 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.91□□□□□ -1.94
Cdx1P18111 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Cdx1P18111 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.91□□□□□ -1.94
Cdx1P18111 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Cdx1P18111 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Cdx1P18111 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.9□□□□□ -1.94
Cdx1P18111 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Cdx1P18111 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Cdx1P18111 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.9□□□□□ -1.94
Cdx1P18111 Gm26273-201ENSMUST00000104180 131 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm24982-201ENSMUST00000104456 132 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm12458-201ENSMUST00000119387 495 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm13210-201ENSMUST00000121483 273 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm7618-201ENSMUST00000121643 171 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm15065-201ENSMUST00000121699 273 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm11692-201ENSMUST00000122121 902 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm11819-201ENSMUST00000122192 372 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm12885-201ENSMUST00000122246 328 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.9□□□□□ -1.95
Cdx1P18111 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm25572-201ENSMUST00000157527 172 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm23587-201ENSMUST00000157658 84 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm10067-201ENSMUST00000179462 348 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Mir6914-201ENSMUST00000184999 69 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm29299-201ENSMUST00000185609 923 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm28623-201ENSMUST00000187219 192 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm29573-201ENSMUST00000190291 919 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm37281-201ENSMUST00000192412 439 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm37501-201ENSMUST00000192830 691 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm38279-201ENSMUST00000194067 1131 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm38018-201ENSMUST00000195651 540 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm34779-201ENSMUST00000210036 263 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm35262-201ENSMUST00000215133 267 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms