Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RaraP11416 Gm24409-201ENSMUST00000157881 152 ntBASIC5.37□□□□□ -1.55
RaraP11416 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.37□□□□□ -1.55
RaraP11416 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
RaraP11416 Gm4617-201ENSMUST00000178993 331 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm26960-201ENSMUST00000182263 412 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.37□□□□□ -1.55
RaraP11416 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
RaraP11416 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.37□□□□□ -1.55
RaraP11416 Gm28468-201ENSMUST00000188536 615 ntBASIC5.37□□□□□ -1.55
RaraP11416 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RaraP11416 Gm32033-201ENSMUST00000193483 339 ntBASIC5.37□□□□□ -1.55
RaraP11416 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm32536-201ENSMUST00000205209 445 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm45704-201ENSMUST00000212582 403 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm45777-201ENSMUST00000213009 301 ntBASIC5.37□□□□□ -1.55
RaraP11416 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.37□□□□□ -1.55
RaraP11416 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.37□□□□□ -1.55
RaraP11416 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.37□□□□□ -1.55
RaraP11416 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RaraP11416 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm22577-201ENSMUST00000083731 109 ntBASIC5.37□□□□□ -1.55
RaraP11416 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RaraP11416 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
RaraP11416 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.37□□□□□ -1.55
RaraP11416 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RaraP11416 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RaraP11416 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.37□□□□□ -1.55
RaraP11416 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
RaraP11416 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.36□□□□□ -1.55
RaraP11416 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
RaraP11416 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
RaraP11416 Gm25419-201ENSMUST00000104215 191 ntBASIC5.36□□□□□ -1.55
RaraP11416 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Gm23463-201ENSMUST00000122468 99 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.36□□□□□ -1.55
RaraP11416 Gm24060-201ENSMUST00000157494 95 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Mir6416-201ENSMUST00000183664 117 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm29350-201ENSMUST00000189141 541 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm29262-201ENSMUST00000190084 196 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm38150-201ENSMUST00000192996 452 ntBASIC5.36□□□□□ -1.55
RaraP11416 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm7721-201ENSMUST00000200446 546 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm18468-201ENSMUST00000207321 369 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm18470-201ENSMUST00000207467 420 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm18465-201ENSMUST00000207468 369 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm18464-201ENSMUST00000207803 420 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm18458-201ENSMUST00000207908 369 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm18461-201ENSMUST00000208421 420 ntBASIC5.36□□□□□ -1.55
RaraP11416 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.36□□□□□ -1.55
RaraP11416 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Snora23-201ENSMUST00000082517 184 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm23330-201ENSMUST00000082660 164 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm24706-201ENSMUST00000082806 137 ntBASIC5.36□□□□□ -1.55
RaraP11416 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RaraP11416 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RaraP11416 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RaraP11416 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RaraP11416 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RaraP11416 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RaraP11416 Gm13046-201ENSMUST00000117391 501 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm15844-201ENSMUST00000118016 576 ntBASIC5.35□□□□□ -1.55
RaraP11416 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.35□□□□□ -1.55
RaraP11416 Gm24216-201ENSMUST00000158259 117 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm24577-201ENSMUST00000158580 63 ntBASIC5.35□□□□□ -1.55
RaraP11416 Snora15-201ENSMUST00000177461 131 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm29192-201ENSMUST00000190942 377 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm43554-201ENSMUST00000199987 186 ntBASIC5.35□□□□□ -1.55
RaraP11416 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm19126-201ENSMUST00000207896 509 ntBASIC5.35□□□□□ -1.55
RaraP11416 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.35□□□□□ -1.55
RaraP11416 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.35□□□□□ -1.55
RaraP11416 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.35□□□□□ -1.55
RaraP11416 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm46997-201ENSMUST00000222108 217 ntBASIC5.35□□□□□ -1.55
RaraP11416 Gm23645-201ENSMUST00000083228 108 ntBASIC5.35□□□□□ -1.55
RaraP11416 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RaraP11416 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.35□□□□□ -1.55
RaraP11416 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RaraP11416 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms