Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm37300-201ENSMUST00000193327 280 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm4248-201ENSMUST00000196905 316 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm43856-201ENSMUST00000197004 369 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm5551-201ENSMUST00000199720 690 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.72□□□□□ -1.81
Lire1P11260 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.72□□□□□ -1.81
Lire1P11260 Gm44887-201ENSMUST00000208980 178 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Lire1P11260 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.72□□□□□ -1.81
Lire1P11260 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.72□□□□□ -1.81
Lire1P11260 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Gm9765-201ENSMUST00000043170 321 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Lire1P11260 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lire1P11260 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Lire1P11260 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Lire1P11260 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Lire1P11260 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.71□□□□□ -1.81
Lire1P11260 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Lire1P11260 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Lire1P11260 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Lire1P11260 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Lire1P11260 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.71□□□□□ -1.82
Lire1P11260 Gm11372-201ENSMUST00000117348 570 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm12788-201ENSMUST00000119090 308 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm15799-201ENSMUST00000120899 289 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm25713-201ENSMUST00000158625 109 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Lire1P11260 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Mir6996-201ENSMUST00000183922 61 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Mir6383-201ENSMUST00000184545 116 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm28650-201ENSMUST00000188413 411 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.71□□□□□ -1.82
Lire1P11260 Gm18956-201ENSMUST00000192857 480 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Lire1P11260 Gm43730-201ENSMUST00000199863 372 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm43039-201ENSMUST00000202883 963 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Lire1P11260 Gm18585-201ENSMUST00000215197 556 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Gm4921-201ENSMUST00000219804 992 ntBASIC3.71□□□□□ -1.82
Lire1P11260 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.71□□□□□ -1.82
Lire1P11260 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Lire1P11260 Gm23939-201ENSMUST00000082880 133 ntBASIC3.71□□□□□ -1.82
Lire1P11260 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Lire1P11260 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Lire1P11260 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.71□□□□□ -1.82
Lire1P11260 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Lire1P11260 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Lire1P11260 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lire1P11260 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lire1P11260 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm15159-201ENSMUST00000117062 764 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm12268-201ENSMUST00000118398 442 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm13873-201ENSMUST00000119208 427 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm5379-201ENSMUST00000120973 826 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm13210-201ENSMUST00000121483 273 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm15065-201ENSMUST00000121699 273 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm26036-201ENSMUST00000158149 144 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm10357-201ENSMUST00000159886 264 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.7□□□□□ -1.82
Lire1P11260 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm35702-201ENSMUST00000198653 511 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.7□□□□□ -1.82
Lire1P11260 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm44332-201ENSMUST00000203712 433 ntBASIC3.7□□□□□ -1.82
Lire1P11260 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm45530-201ENSMUST00000211658 225 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Lire1P11260 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Gm10088-201ENSMUST00000074116 423 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.7□□□□□ -1.82
Lire1P11260 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lire1P11260 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lire1P11260 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Lire1P11260 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lire1P11260 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lire1P11260 Gm649-201ENSMUST00000117284 1054 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm12090-201ENSMUST00000118692 758 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.69□□□□□ -1.82
Lire1P11260 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms