Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col1a1P11087 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Col1a1P11087 Gm11363-201ENSMUST00000121672 548 ntBASIC3.12□□□□□ -1.91
Col1a1P11087 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.12□□□□□ -1.91
Col1a1P11087 Gm24082-201ENSMUST00000175175 83 ntBASIC3.12□□□□□ -1.91
Col1a1P11087 Gm19224-201ENSMUST00000190477 793 ntBASIC3.12□□□□□ -1.91
Col1a1P11087 Gm25820-202ENSMUST00000197479 128 ntBASIC3.12□□□□□ -1.91
Col1a1P11087 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.12□□□□□ -1.91
Col1a1P11087 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.12□□□□□ -1.91
Col1a1P11087 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col1a1P11087 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col1a1P11087 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col1a1P11087 Gm13349-201ENSMUST00000118436 411 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.11□□□□□ -1.91
Col1a1P11087 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col1a1P11087 Gm22378-201ENSMUST00000157481 111 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Gm20450-201ENSMUST00000173652 147 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Gm27220-201ENSMUST00000183453 262 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Mir6386-201ENSMUST00000183558 104 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Gm2676-201ENSMUST00000207279 606 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Gm45879-201ENSMUST00000212521 392 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.11□□□□□ -1.91
Col1a1P11087 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col1a1P11087 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Col1a1P11087 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col1a1P11087 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC3.1□□□□□ -1.91
Col1a1P11087 Gm24210-201ENSMUST00000158263 133 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm16584-201ENSMUST00000159267 189 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col1a1P11087 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.1□□□□□ -1.91
Col1a1P11087 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.1□□□□□ -1.91
Col1a1P11087 Gm25820-201ENSMUST00000198589 127 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm42828-201ENSMUST00000199669 469 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.1□□□□□ -1.91
Col1a1P11087 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col1a1P11087 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col1a1P11087 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.1□□□□□ -1.91
Col1a1P11087 Gm24670-201ENSMUST00000104154 132 ntBASIC3.09□□□□□ -1.91
Col1a1P11087 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col1a1P11087 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col1a1P11087 Gm28146-201ENSMUST00000185517 701 ntBASIC3.09□□□□□ -1.91
Col1a1P11087 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.09□□□□□ -1.91
Col1a1P11087 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.09□□□□□ -1.91
Col1a1P11087 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col1a1P11087 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.09□□□□□ -1.91
Col1a1P11087 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col1a1P11087 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Col1a1P11087 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col1a1P11087 Gm26015-201ENSMUST00000104402 125 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Gm23551-201ENSMUST00000116852 121 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Gm15267-201ENSMUST00000120888 464 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Gm14957-201ENSMUST00000121069 817 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Gm14848-201ENSMUST00000121850 467 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Gm22330-201ENSMUST00000158068 115 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Col1a1P11087 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col1a1P11087 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col1a1P11087 Mir6418-201ENSMUST00000185075 115 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC3.09□□□□□ -1.92
Col1a1P11087 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.09□□□□□ -1.92
Col1a1P11087 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.08□□□□□ -1.92
Col1a1P11087 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col1a1P11087 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.08□□□□□ -1.92
Col1a1P11087 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col1a1P11087 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col1a1P11087 Gm26341-201ENSMUST00000104561 134 ntBASIC3.08□□□□□ -1.92
Col1a1P11087 Gm14627-201ENSMUST00000118931 567 ntBASIC3.08□□□□□ -1.92
Col1a1P11087 Gm15733-201ENSMUST00000132957 242 ntBASIC3.08□□□□□ -1.92
Col1a1P11087 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.08□□□□□ -1.92
Col1a1P11087 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.08□□□□□ -1.92
Col1a1P11087 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col1a1P11087 Olfr844-201ENSMUST00000054106 930 ntBASIC3.08□□□□□ -1.92
Col1a1P11087 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col1a1P11087 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col1a1P11087 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Mir669d-201ENSMUST00000104644 121 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm13880-201ENSMUST00000118421 474 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm12878-201ENSMUST00000118744 332 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC3.07□□□□□ -1.92
Col1a1P11087 Gm24532-201ENSMUST00000157951 286 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm27796-201ENSMUST00000183863 261 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Mir7226-201ENSMUST00000184953 60 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm28639-201ENSMUST00000191519 481 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm37377-201ENSMUST00000191733 304 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm43655-201ENSMUST00000197367 222 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Gm5374-201ENSMUST00000222868 657 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms