Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm9850-201ENSMUST00000117916 227 ntBASIC2.59□□□□□ -1.99
Cacna1hO88427 Gm11943-201ENSMUST00000119473 327 ntBASIC2.59□□□□□ -1.99
Cacna1hO88427 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cacna1hO88427 Gm37111-201ENSMUST00000193250 634 ntBASIC2.59□□□□□ -1.99
Cacna1hO88427 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cacna1hO88427 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.59□□□□□ -1.99
Cacna1hO88427 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.59□□□□□ -1.99
Cacna1hO88427 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cacna1hO88427 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cacna1hO88427 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Cacna1hO88427 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cacna1hO88427 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.59□□□□□ -1.99
Cacna1hO88427 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Cacna1hO88427 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Cacna1hO88427 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.59□□□□□ -2
Cacna1hO88427 Gm14125-201ENSMUST00000113442 680 ntBASIC2.59□□□□□ -2
Cacna1hO88427 Gm22713-201ENSMUST00000116895 130 ntBASIC2.59□□□□□ -2
Cacna1hO88427 Gm24436-201ENSMUST00000157889 302 ntBASIC2.59□□□□□ -2
Cacna1hO88427 Gm25902-201ENSMUST00000158493 318 ntBASIC2.59□□□□□ -2
Cacna1hO88427 Gm28002-201ENSMUST00000184832 100 ntBASIC2.59□□□□□ -2
Cacna1hO88427 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.59□□□□□ -2
Cacna1hO88427 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cacna1hO88427 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cacna1hO88427 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cacna1hO88427 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm13170-201ENSMUST00000119716 643 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cacna1hO88427 Gm25836-201ENSMUST00000158918 123 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Mir6925-201ENSMUST00000197857 70 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm43975-201ENSMUST00000203023 481 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.58□□□□□ -2
Cacna1hO88427 Gm18387-201ENSMUST00000220333 702 ntBASIC2.58□□□□□ -2
Cacna1hO88427 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cacna1hO88427 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cacna1hO88427 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cacna1hO88427 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cacna1hO88427 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cacna1hO88427 Gm14880-201ENSMUST00000117581 292 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm15399-201ENSMUST00000118055 724 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm13314-201ENSMUST00000118742 335 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm12849-201ENSMUST00000120013 739 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm12956-201ENSMUST00000122184 414 ntBASIC2.58□□□□□ -2
Cacna1hO88427 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.58□□□□□ -2
Cacna1hO88427 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Gm44161-201ENSMUST00000203532 253 ntBASIC2.58□□□□□ -2
Cacna1hO88427 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.58□□□□□ -2
Cacna1hO88427 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cacna1hO88427 Gm7974-201ENSMUST00000117154 408 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.57□□□□□ -2
Cacna1hO88427 Gm17183-201ENSMUST00000171170 493 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm22192-201ENSMUST00000175128 85 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm43587-201ENSMUST00000199590 204 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cacna1hO88427 Gm25632-201ENSMUST00000083112 85 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cacna1hO88427 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Cacna1hO88427 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Cacna1hO88427 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Cacna1hO88427 Snord93-201ENSMUST00000175580 71 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm28871-201ENSMUST00000186191 687 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm28057-201ENSMUST00000186603 615 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Cacna1hO88427 Gm29366-201ENSMUST00000190481 699 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm37966-201ENSMUST00000193122 326 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Gm44712-201ENSMUST00000206250 1076 ntBASIC2.57□□□□□ -2
Cacna1hO88427 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Cacna1hO88427 Mir542-201ENSMUST00000102186 85 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC2.56□□□□□ -2
Cacna1hO88427 Gm24757-201ENSMUST00000176987 371 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.56□□□□□ -2
Cacna1hO88427 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cacna1hO88427 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
Cacna1hO88427 Gm12513-201ENSMUST00000118617 352 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC2.56□□□□□ -2
Cacna1hO88427 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cacna1hO88427 Gm37684-201ENSMUST00000192779 355 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Gm20997-201ENSMUST00000205148 231 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Gm17989-201ENSMUST00000211543 412 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.56□□□□□ -2
Cacna1hO88427 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.56□□□□□ -2
Cacna1hO88427 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Cacna1hO88427 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1hO88427 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1hO88427 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Cacna1hO88427 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC2.55□□□□□ -2
Cacna1hO88427 Gm27470-201ENSMUST00000184070 210 ntBASIC2.55□□□□□ -2
Cacna1hO88427 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC2.55□□□□□ -2
Cacna1hO88427 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC2.55□□□□□ -2
Cacna1hO88427 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cacna1hO88427 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC2.55□□□□□ -2
Cacna1hO88427 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.55□□□□□ -2
Cacna1hO88427 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cacna1hO88427 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC2.55□□□□□ -2
Cacna1hO88427 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms