Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm4596-201ENSMUST00000117197 442 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm14939-201ENSMUST00000120347 680 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm12706-201ENSMUST00000121588 698 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Trav20-201ENSMUST00000142754 347 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm24288-201ENSMUST00000157630 144 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm24394-201ENSMUST00000158141 123 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm27271-201ENSMUST00000183509 170 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm37677-201ENSMUST00000194520 7634 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm44016-201ENSMUST00000203463 164 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm17989-201ENSMUST00000211543 412 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm23264-201ENSMUST00000083372 107 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.65□□□□□ -1.98
Col6a3E9PWQ3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Col6a3E9PWQ3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Col6a3E9PWQ3 AC159256.1-201ENSMUST00000224298 1039 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Gm43696-201ENSMUST00000199385 6071 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Gm20074-201ENSMUST00000208144 484 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Mir504-201ENSMUST00000093602 79 ntBASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Col6a3E9PWQ3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm3030-201ENSMUST00000163410 516 ntBASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 AC130536.1-201ENSMUST00000224425 271 ntBASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm12495-201ENSMUST00000119750 447 ntBASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Gm26922-201ENSMUST00000082687 72 ntBASIC2.64□□□□□ -1.99
Col6a3E9PWQ3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Gm15025-201ENSMUST00000118434 418 ntBASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Gm43676-201ENSMUST00000197532 540 ntBASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Gm18698-201ENSMUST00000192327 668 ntBASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col6a3E9PWQ3 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm42841-201ENSMUST00000199806 1932 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm649-201ENSMUST00000117284 1054 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm12803-201ENSMUST00000118907 821 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm12443-201ENSMUST00000122308 323 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm28744-201ENSMUST00000189939 340 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC126253.2-201ENSMUST00000226518 205 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Gm27445-201ENSMUST00000184484 72 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.62□□□□□ -1.99
Col6a3E9PWQ3 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms