Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm27773-201ENSMUST00000184087 78 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm43198-201ENSMUST00000200927 326 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm45814-201ENSMUST00000212646 775 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm7119-201ENSMUST00000221345 695 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm8231-201ENSMUST00000221617 783 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm25765-201ENSMUST00000104100 132 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm7123-201ENSMUST00000117647 213 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm15014-201ENSMUST00000120742 258 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm9785-202ENSMUST00000144563 593 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm25341-201ENSMUST00000157461 268 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm22516-201ENSMUST00000158266 124 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm22766-201ENSMUST00000158372 99 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm24550-201ENSMUST00000158648 279 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm20776-201ENSMUST00000189940 700 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm38076-201ENSMUST00000193889 450 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm43239-201ENSMUST00000200131 201 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm43659-201ENSMUST00000200894 628 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm18194-201ENSMUST00000210455 481 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm15018-201ENSMUST00000117090 633 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm11600-201ENSMUST00000119592 240 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm14600-201ENSMUST00000121032 630 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm12858-201ENSMUST00000121913 208 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm25105-201ENSMUST00000122477 130 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm16101-201ENSMUST00000160695 430 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm17117-201ENSMUST00000163665 299 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm27189-201ENSMUST00000184119 190 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm28146-201ENSMUST00000185517 701 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm37001-201ENSMUST00000193377 190 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Trbv8-201ENSMUST00000194020 285 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm38018-201ENSMUST00000195651 540 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm43115-201ENSMUST00000196244 160 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm18410-201ENSMUST00000207199 577 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm44611-201ENSMUST00000207507 355 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm7380-201ENSMUST00000211599 466 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm18903-201ENSMUST00000215343 480 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.23□□□□□ -1.89
Pcdhgb8A0A140LI48 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms