Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm23609-201ENSMUST00000104542 127 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm26341-201ENSMUST00000104561 134 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm14825-201ENSMUST00000113538 701 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm15019-201ENSMUST00000120148 434 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm12723-201ENSMUST00000120700 451 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm11829-201ENSMUST00000121003 282 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm26088-201ENSMUST00000157896 131 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm23409-201ENSMUST00000158516 237 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm15946-201ENSMUST00000160654 423 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm26928-201ENSMUST00000182674 572 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Mir6353-201ENSMUST00000183596 113 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm36943-201ENSMUST00000194422 282 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 AC160931.2-201ENSMUST00000221445 351 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm6030-201ENSMUST00000078768 402 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm23925-201ENSMUST00000082471 132 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm22979-201ENSMUST00000082609 159 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav6-6A0A075B603 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm25420-201ENSMUST00000104216 127 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm12902-201ENSMUST00000118389 322 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm13210-201ENSMUST00000121483 273 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm14383-201ENSMUST00000121637 386 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm15065-201ENSMUST00000121699 273 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm16533-201ENSMUST00000140035 228 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm26371-201ENSMUST00000157829 104 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm22516-201ENSMUST00000158266 124 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm5967-201ENSMUST00000172723 494 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm19257-201ENSMUST00000186121 183 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm29104-201ENSMUST00000186304 222 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm37193-201ENSMUST00000193087 513 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm38329-201ENSMUST00000193473 427 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm43239-201ENSMUST00000200131 201 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm44266-201ENSMUST00000205235 500 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm9628-201ENSMUST00000222169 725 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm24147-201ENSMUST00000082763 144 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm22043-201ENSMUST00000082993 158 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.19□□□□□ -2.06
Trav6-6A0A075B603 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Mir294-201ENSMUST00000104710 84 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm14448-201ENSMUST00000116383 210 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm22486-201ENSMUST00000116815 137 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm13273-201ENSMUST00000119737 159 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm15799-201ENSMUST00000120899 289 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm25295-201ENSMUST00000122794 306 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm25341-201ENSMUST00000157461 268 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm25427-201ENSMUST00000157605 103 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm22730-201ENSMUST00000158085 171 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm23028-201ENSMUST00000158773 265 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm21893-201ENSMUST00000179119 397 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm27233-201ENSMUST00000184030 307 ntBASIC2.18□□□□□ -2.06
Trav6-6A0A075B603 Gm27893-201ENSMUST00000184408 194 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms