Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm24960-201ENSMUST00000157923 90 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm6245-201ENSMUST00000164699 768 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm4222-201ENSMUST00000165784 470 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Mir5098-201ENSMUST00000175320 82 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm44387-201ENSMUST00000196298 145 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Mir1892-201ENSMUST00000197752 80 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm20948-201ENSMUST00000211091 449 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn5aQ9JJV9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm14771-201ENSMUST00000118249 203 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm22532-201ENSMUST00000158822 140 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm5552-201ENSMUST00000197149 515 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm43440-201ENSMUST00000201957 729 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm4528-201ENSMUST00000207905 551 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm44857-201ENSMUST00000208331 196 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm8423-201ENSMUST00000211387 607 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm18644-201ENSMUST00000211458 815 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm45344-201ENSMUST00000211610 341 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm22979-201ENSMUST00000082609 159 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm23668-201ENSMUST00000157465 111 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm20651-201ENSMUST00000177219 329 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm32222-201ENSMUST00000203296 298 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm31532-201ENSMUST00000203555 767 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm17987-201ENSMUST00000206902 603 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Snord14e-201ENSMUST00000082857 90 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.32□□□□□ -1.88
Scn5aQ9JJV9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm15933-201ENSMUST00000117215 616 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm23824-201ENSMUST00000158741 276 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm26423-201ENSMUST00000104277 128 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm2288-201ENSMUST00000118560 638 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm3835-201ENSMUST00000120752 403 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm23205-201ENSMUST00000158671 103 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Gm44059-201ENSMUST00000204048 351 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Scn5aQ9JJV9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms