Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm23839-201ENSMUST00000116957 109 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm14890-201ENSMUST00000117660 676 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm7079-201ENSMUST00000119726 171 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm11325-201ENSMUST00000119967 469 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm12779-201ENSMUST00000121496 143 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm25459-201ENSMUST00000157953 114 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm25445-201ENSMUST00000158996 299 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm28660-201ENSMUST00000186496 253 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm37416-201ENSMUST00000193596 318 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm9317-201ENSMUST00000197055 862 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm44543-201ENSMUST00000209136 396 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm18602-201ENSMUST00000209794 851 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm45879-201ENSMUST00000212521 392 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm10709-201ENSMUST00000213318 480 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm4510-201ENSMUST00000218265 427 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm16335-201ENSMUST00000077495 309 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm22358-201ENSMUST00000082877 122 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm23845-201ENSMUST00000083834 152 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Gm25188-201ENSMUST00000083913 122 ntBASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim39Q9ESN2 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm15553-201ENSMUST00000118757 430 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm15981-201ENSMUST00000119196 457 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm13153-201ENSMUST00000120969 637 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm24750-201ENSMUST00000157843 104 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm22210-201ENSMUST00000158101 144 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm22538-201ENSMUST00000158169 299 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm25714-201ENSMUST00000158626 296 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm24343-201ENSMUST00000158708 111 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm17162-201ENSMUST00000168538 473 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm22114-201ENSMUST00000177756 107 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm8939-201ENSMUST00000192577 964 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm43855-201ENSMUST00000197462 507 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.02□□□□□ -1.61
Trim39Q9ESN2 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm23142-201ENSMUST00000101848 105 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm26240-201ENSMUST00000101893 105 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm14825-201ENSMUST00000113538 701 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm11699-201ENSMUST00000119016 401 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm15044-201ENSMUST00000120703 598 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm25291-201ENSMUST00000122795 144 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm23829-201ENSMUST00000157392 270 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm22769-201ENSMUST00000158367 98 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm24876-201ENSMUST00000158780 92 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm3851-201ENSMUST00000168653 318 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm29352-201ENSMUST00000188054 544 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm7837-201ENSMUST00000190873 412 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm37308-201ENSMUST00000194684 100 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm38060-201ENSMUST00000194822 464 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm45185-201ENSMUST00000207556 404 ntBASIC5.01□□□□□ -1.61
Trim39Q9ESN2 Gm18320-201ENSMUST00000211304 595 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms