Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm9836-201ENSMUST00000117132 216 ntBASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm26004-201ENSMUST00000158804 116 ntBASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm43083-201ENSMUST00000199594 476 ntBASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Gm44030-201ENSMUST00000204865 432 ntBASIC2.6□□□□□ -1.99
Cdh23Q99PF4 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cdh23Q99PF4 Gm20612-201ENSMUST00000176318 236 ntBASIC2.59□□□□□ -2
Cdh23Q99PF4 Gm44609-201ENSMUST00000207157 460 ntBASIC2.59□□□□□ -2
Cdh23Q99PF4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.59□□□□□ -2
Cdh23Q99PF4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC2.59□□□□□ -2
Cdh23Q99PF4 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.59□□□□□ -2
Cdh23Q99PF4 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cdh23Q99PF4 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.59□□□□□ -2
Cdh23Q99PF4 Gm25902-201ENSMUST00000158493 318 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm45296-201ENSMUST00000209625 205 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm45380-201ENSMUST00000210465 315 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm15019-201ENSMUST00000120148 434 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm45654-201ENSMUST00000210980 123 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm37900-201ENSMUST00000195510 3805 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdh23Q99PF4 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cdh23Q99PF4 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cdh23Q99PF4 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm23010-201ENSMUST00000104151 126 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm14823-201ENSMUST00000117698 238 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm18448-201ENSMUST00000186286 599 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm29657-201ENSMUST00000189807 342 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.58□□□□□ -2
Cdh23Q99PF4 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdh23Q99PF4 Mir504-201ENSMUST00000093602 79 ntBASIC2.58□□□□□ -2
Cdh23Q99PF4 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm6797-201ENSMUST00000119440 512 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm22084-201ENSMUST00000157585 105 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm24436-201ENSMUST00000157889 302 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm12849-201ENSMUST00000120013 739 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm23213-201ENSMUST00000122715 313 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm28534-201ENSMUST00000187744 676 ntBASIC2.57□□□□□ -2
Cdh23Q99PF4 Gm28788-201ENSMUST00000189717 375 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms