Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cdk5rap3Q99LM2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm14125-201ENSMUST00000113442 680 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm11577-201ENSMUST00000118030 737 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm16445-201ENSMUST00000120399 714 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm22816-201ENSMUST00000157450 117 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm25438-201ENSMUST00000158281 110 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Mir6963-201ENSMUST00000183535 71 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm37828-201ENSMUST00000192496 432 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm37989-201ENSMUST00000195202 803 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm6929-201ENSMUST00000210930 468 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Gm40598-201ENSMUST00000222953 547 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Snord66-201ENSMUST00000104051 75 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm13122-201ENSMUST00000118380 453 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm7219-201ENSMUST00000119619 297 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm26254-201ENSMUST00000122491 118 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm27903-201ENSMUST00000175482 126 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm25198-201ENSMUST00000178574 110 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.69□□□□□ -1.82
Cdk5rap3Q99LM2 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm5757-201ENSMUST00000117494 528 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm2003-201ENSMUST00000118537 636 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm12543-201ENSMUST00000120410 543 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm1989-201ENSMUST00000126244 636 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm23754-201ENSMUST00000157576 63 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm27189-201ENSMUST00000184119 190 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm38149-201ENSMUST00000191943 339 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm7449-201ENSMUST00000194393 663 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm44058-201ENSMUST00000204335 467 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm8209-201ENSMUST00000206386 553 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm45146-201ENSMUST00000207108 221 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm45530-201ENSMUST00000211658 225 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Gm45696-201ENSMUST00000212088 985 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.68□□□□□ -1.82
Cdk5rap3Q99LM2 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms