Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Mir690-201ENSMUST00000102110 109 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm22371-201ENSMUST00000104588 130 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm11429-201ENSMUST00000119089 144 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm12244-201ENSMUST00000119500 291 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm15244-201ENSMUST00000121122 130 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Mir6911-201ENSMUST00000184241 69 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm29111-201ENSMUST00000188823 696 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm28584-201ENSMUST00000191489 696 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm38138-201ENSMUST00000193274 696 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm37358-201ENSMUST00000195492 479 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm43392-201ENSMUST00000196560 434 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm45236-201ENSMUST00000208632 229 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm18467-201ENSMUST00000208805 434 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm45380-201ENSMUST00000210465 315 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 LOC667541-201ENSMUST00000223408 278 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 AC113031.4-201ENSMUST00000228381 514 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Pcdhb3Q91XZ7 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm45557-201ENSMUST00000210004 1651 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm12568-201ENSMUST00000117362 624 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm25783-201ENSMUST00000122525 190 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm26479-201ENSMUST00000122620 106 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm26354-201ENSMUST00000158221 129 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm25834-201ENSMUST00000158916 101 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm16326-201ENSMUST00000162843 414 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm29479-201ENSMUST00000190352 455 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm19123-201ENSMUST00000190716 651 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm9134-201ENSMUST00000193186 551 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm37997-201ENSMUST00000193515 267 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Mir3535-201ENSMUST00000197651 147 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm44539-201ENSMUST00000206010 238 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 AC154636.2-201ENSMUST00000222538 161 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm22704-201ENSMUST00000083027 137 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm22126-201ENSMUST00000083244 142 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Pcdhb3Q91XZ7 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Pcdhb3Q91XZ7 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Pcdhb3Q91XZ7 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Pcdhb3Q91XZ7 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Pcdhb3Q91XZ7 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Gm15377-201ENSMUST00000119594 246 ntBASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Gm12640-201ENSMUST00000120097 310 ntBASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Gm14694-201ENSMUST00000121856 282 ntBASIC5.71□□□□□ -1.5
Pcdhb3Q91XZ7 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms