Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm38041-201ENSMUST00000194445 661 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm19418-201ENSMUST00000197436 580 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm17956-201ENSMUST00000199931 838 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm18855-201ENSMUST00000206689 570 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm19096-201ENSMUST00000209705 766 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm45392-201ENSMUST00000210441 214 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm31931-201ENSMUST00000219666 222 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm3338-201ENSMUST00000220982 269 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm22826-201ENSMUST00000083774 165 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm24469-201ENSMUST00000104487 131 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm14677-201ENSMUST00000117866 486 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm23716-201ENSMUST00000157348 144 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm22390-201ENSMUST00000157588 325 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm26320-201ENSMUST00000157742 306 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm27905-201ENSMUST00000184005 207 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm45651-201ENSMUST00000210857 335 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm6842-201ENSMUST00000211361 390 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm8274-201ENSMUST00000219820 463 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm24707-201ENSMUST00000082812 107 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm23099-201ENSMUST00000083454 139 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Mir16-2-201ENSMUST00000083672 95 ntBASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9Q8VC31 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Ccdc9Q8VC31 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.71□□□□□ -1.65
Ccdc9Q8VC31 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Ccdc9Q8VC31 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm23226-201ENSMUST00000116927 103 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm12814-201ENSMUST00000117091 846 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm15001-201ENSMUST00000117657 795 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm16383-201ENSMUST00000118122 232 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm11566-201ENSMUST00000118550 203 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm12328-201ENSMUST00000118611 197 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm15206-201ENSMUST00000119143 454 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm11746-201ENSMUST00000119843 821 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm15168-201ENSMUST00000121057 316 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm23789-201ENSMUST00000122536 301 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm24517-201ENSMUST00000122560 107 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Mir6926-201ENSMUST00000184562 68 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm27588-201ENSMUST00000185096 263 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm7634-201ENSMUST00000185778 553 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm28956-201ENSMUST00000189047 427 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm37869-201ENSMUST00000193385 595 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm2077-201ENSMUST00000195017 319 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm36259-201ENSMUST00000197340 392 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 AC091260.1-201ENSMUST00000216112 229 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc9Q8VC31 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm6584-201ENSMUST00000119671 447 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm12466-201ENSMUST00000121199 620 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms