Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Snora23-201ENSMUST00000082517 184 ntBASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc58Q8R3Q6 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm14142-201ENSMUST00000117833 296 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm13973-201ENSMUST00000121371 894 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm24240-201ENSMUST00000157785 135 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm25835-201ENSMUST00000158917 144 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm43308-201ENSMUST00000197236 373 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm25203-202ENSMUST00000200458 216 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr936-202ENSMUST00000216912 937 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Gm25203-201ENSMUST00000082842 215 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Snord104-201ENSMUST00000083192 70 ntBASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc58Q8R3Q6 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm11285-201ENSMUST00000118443 322 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm14159-201ENSMUST00000119832 451 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm26099-201ENSMUST00000157248 109 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm25669-201ENSMUST00000157699 112 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm23799-201ENSMUST00000175559 120 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm36943-201ENSMUST00000194422 282 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm22897-201ENSMUST00000197860 128 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm3010-201ENSMUST00000198805 448 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm6012-201ENSMUST00000210821 730 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm2059-201ENSMUST00000212025 287 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm18487-201ENSMUST00000215826 878 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Olfr480-201ENSMUST00000071658 1029 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Mir27a-201ENSMUST00000083510 87 ntBASIC2.56□□□□□ -2
Ccdc58Q8R3Q6 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Mir294-201ENSMUST00000104710 84 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm14579-201ENSMUST00000117068 283 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm12902-201ENSMUST00000118389 322 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm12095-201ENSMUST00000121962 816 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm22956-201ENSMUST00000122520 80 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm22059-201ENSMUST00000157544 104 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm22187-201ENSMUST00000157819 129 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17091-201ENSMUST00000163248 357 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21842-201ENSMUST00000177552 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21626-201ENSMUST00000177791 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21562-201ENSMUST00000177888 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21539-201ENSMUST00000177925 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17522-201ENSMUST00000178144 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21599-201ENSMUST00000178249 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21914-201ENSMUST00000178452 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21723-201ENSMUST00000178692 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21916-201ENSMUST00000178771 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21801-201ENSMUST00000178865 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21633-201ENSMUST00000178941 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17412-201ENSMUST00000179261 468 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21821-201ENSMUST00000179646 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21588-201ENSMUST00000180074 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21780-201ENSMUST00000180128 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21572-201ENSMUST00000180134 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm21529-201ENSMUST00000180175 498 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Mir6943-201ENSMUST00000185186 66 ntBASIC2.55□□□□□ -2
Ccdc58Q8R3Q6 Gm29370-202ENSMUST00000187476 499 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms