Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm28975-201ENSMUST00000186412 686 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm7142-201ENSMUST00000194232 586 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm43124-201ENSMUST00000201878 278 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm44266-201ENSMUST00000205235 500 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm44688-201ENSMUST00000209083 537 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm9628-201ENSMUST00000222169 725 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm26129-201ENSMUST00000082719 107 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm24147-201ENSMUST00000082763 144 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm11576-201ENSMUST00000117433 417 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm4910-201ENSMUST00000119605 366 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm24876-201ENSMUST00000158780 92 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm17075-201ENSMUST00000171924 670 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm29259-201ENSMUST00000186396 694 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm5185-201ENSMUST00000080271 619 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28aQ8CEI3 Gm38382-201ENSMUST00000193790 2499 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm24715-201ENSMUST00000102377 95 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm24118-201ENSMUST00000103972 126 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm26075-201ENSMUST00000104062 121 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm14537-201ENSMUST00000117464 599 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm24745-201ENSMUST00000157840 85 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm22330-201ENSMUST00000158068 115 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm20773-201ENSMUST00000178940 681 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm27783-201ENSMUST00000183534 105 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm18660-201ENSMUST00000199542 629 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm44076-201ENSMUST00000203072 520 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm44030-201ENSMUST00000204865 432 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm20039-201ENSMUST00000210329 394 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 AC132104.1-201ENSMUST00000213615 260 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Gm45104-201ENSMUST00000208748 4350 ntBASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc28aQ8CEI3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm9850-201ENSMUST00000117916 227 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm22516-201ENSMUST00000158266 124 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Mir3104-201ENSMUST00000174911 63 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Snord53-201ENSMUST00000175146 78 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm21816-201ENSMUST00000179255 360 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm27330-201ENSMUST00000184689 132 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm28390-201ENSMUST00000185212 700 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm38329-201ENSMUST00000193473 427 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm38053-201ENSMUST00000193938 160 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm32447-201ENSMUST00000194265 697 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm43115-201ENSMUST00000196244 160 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm18015-201ENSMUST00000214879 316 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc28aQ8CEI3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms