Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm14975-201ENSMUST00000118741 664 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm16458-201ENSMUST00000121428 502 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm15116-201ENSMUST00000122248 663 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm12998-201ENSMUST00000122445 789 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm15733-201ENSMUST00000132957 242 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm17063-201ENSMUST00000168135 456 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm25748-201ENSMUST00000175487 70 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm6113-201ENSMUST00000180319 639 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm19637-201ENSMUST00000185933 579 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm6501-201ENSMUST00000187178 916 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm18505-201ENSMUST00000187360 790 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm42832-201ENSMUST00000196361 745 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm8681-201ENSMUST00000219115 618 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm16419-201ENSMUST00000221057 625 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm5265-201ENSMUST00000076828 342 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 BC051076-202ENSMUST00000199477 2868 ntBASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Lrif1Q8CDD9 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm13228-201ENSMUST00000118937 634 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm16005-201ENSMUST00000120515 269 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm13471-201ENSMUST00000122057 433 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm22380-201ENSMUST00000157479 95 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm23592-201ENSMUST00000157859 117 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm23387-201ENSMUST00000158586 107 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Mir7658-201ENSMUST00000184043 57 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm28552-201ENSMUST00000190725 388 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm17966-201ENSMUST00000193453 594 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm44348-201ENSMUST00000200165 122 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm43228-201ENSMUST00000200735 264 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm31520-201ENSMUST00000203048 733 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm35405-201ENSMUST00000218754 400 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm8249-201ENSMUST00000219225 465 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm8274-201ENSMUST00000219820 463 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm18116-201ENSMUST00000220920 537 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Snora7a-201ENSMUST00000082629 140 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm23460-201ENSMUST00000083258 109 ntBASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Lrif1Q8CDD9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.34□□□□□ -1.88
Lrif1Q8CDD9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Lrif1Q8CDD9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.34□□□□□ -1.88
Lrif1Q8CDD9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm24671-201ENSMUST00000104159 158 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm15108-201ENSMUST00000116160 803 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm16053-201ENSMUST00000120511 188 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm15111-201ENSMUST00000122142 878 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm22107-201ENSMUST00000122548 100 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm24537-201ENSMUST00000157950 102 ntBASIC3.33□□□□□ -1.88
Lrif1Q8CDD9 Gm24553-201ENSMUST00000158653 131 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms