Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm45246-201ENSMUST00000210820 367 ntBASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Gm7204-201ENSMUST00000062591 600 ntBASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col6a6Q8C6K9 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm15074-201ENSMUST00000117603 936 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm22534-201ENSMUST00000158173 104 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm20612-201ENSMUST00000176318 236 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.34□□□□□ -2.03
Col6a6Q8C6K9 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Mir682-201ENSMUST00000102281 96 ntBASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm14897-201ENSMUST00000118213 207 ntBASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Snord93-201ENSMUST00000175580 71 ntBASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 AC154838.2-201ENSMUST00000226602 747 ntBASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col6a6Q8C6K9 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm13349-201ENSMUST00000118436 411 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm11877-201ENSMUST00000118921 852 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm23957-201ENSMUST00000157209 90 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm6245-201ENSMUST00000164699 768 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm9377-201ENSMUST00000207227 623 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm45240-201ENSMUST00000211437 674 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm13880-201ENSMUST00000118421 474 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm22551-201ENSMUST00000157795 103 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm27648-201ENSMUST00000184315 107 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm38166-201ENSMUST00000191660 471 ntBASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.33□□□□□ -2.04
Col6a6Q8C6K9 AC124562.2-201ENSMUST00000223888 2313 ntBASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Gm12956-201ENSMUST00000122184 414 ntBASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Mir6418-201ENSMUST00000185075 115 ntBASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Gm43804-201ENSMUST00000198280 456 ntBASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Mir322-201ENSMUST00000083484 95 ntBASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a6Q8C6K9 Gm24273-201ENSMUST00000102332 164 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm24601-201ENSMUST00000157970 143 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm7582-201ENSMUST00000160831 603 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm16318-201ENSMUST00000162402 601 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm5374-201ENSMUST00000222868 657 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm24532-201ENSMUST00000157951 286 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm45317-201ENSMUST00000210385 223 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms