Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm22320-201ENSMUST00000157149 312 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm26195-201ENSMUST00000175035 101 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm22642-201ENSMUST00000175352 252 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm3351-201ENSMUST00000193454 505 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Ighv1-1-201ENSMUST00000194912 291 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm44342-201ENSMUST00000196874 129 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm44383-201ENSMUST00000198940 129 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm44111-201ENSMUST00000204649 399 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm44856-201ENSMUST00000206639 304 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim35Q8C006 Mir7b-201ENSMUST00000083557 111 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim35Q8C006 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim35Q8C006 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.68□□□□□ -1.34
Trim35Q8C006 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim35Q8C006 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim35Q8C006 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Trim35Q8C006 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim35Q8C006 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim35Q8C006 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim35Q8C006 Snord88a-201ENSMUST00000116723 90 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm13451-201ENSMUST00000117649 592 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm14706-201ENSMUST00000117744 255 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm14520-201ENSMUST00000119258 387 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm5809-201ENSMUST00000121854 529 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm12175-201ENSMUST00000122081 345 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm23331-201ENSMUST00000157423 108 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm26084-201ENSMUST00000157903 104 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm23408-201ENSMUST00000158523 265 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm26200-201ENSMUST00000180273 79 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm44411-201ENSMUST00000204172 349 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm35405-201ENSMUST00000218754 400 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Gm22248-201ENSMUST00000082482 150 ntBASIC6.67□□□□□ -1.34
Trim35Q8C006 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim35Q8C006 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm24473-201ENSMUST00000104483 131 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm11822-201ENSMUST00000119177 415 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm15149-201ENSMUST00000119370 360 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm25395-201ENSMUST00000157343 272 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm10177-201ENSMUST00000160052 444 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm28755-201ENSMUST00000185773 199 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim35Q8C006 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm42673-201ENSMUST00000202676 337 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm46231-201ENSMUST00000220152 314 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm19786-201ENSMUST00000222589 580 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Mir106b-201ENSMUST00000083580 82 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm24164-201ENSMUST00000093663 104 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.66□□□□□ -1.34
Trim35Q8C006 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim35Q8C006 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trim35Q8C006 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim35Q8C006 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms