Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm25272-201ENSMUST00000104293 128 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm12495-201ENSMUST00000119750 447 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm12276-201ENSMUST00000121709 301 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm25807-201ENSMUST00000122783 305 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm23671-201ENSMUST00000157472 103 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm25519-201ENSMUST00000158392 127 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm37164-201ENSMUST00000192809 637 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm21007-201ENSMUST00000221024 326 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Clrn3Q8BHH8 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm23530-201ENSMUST00000104564 137 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm13379-201ENSMUST00000118053 621 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm22478-201ENSMUST00000122570 154 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm25572-201ENSMUST00000157527 172 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm10075-201ENSMUST00000162030 545 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm29064-201ENSMUST00000187014 813 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm20162-201ENSMUST00000193629 871 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm45080-201ENSMUST00000206648 283 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm10161-201ENSMUST00000091506 204 ntBASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.1□□□□□ -1.91
Clrn3Q8BHH8 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm25727-201ENSMUST00000104522 131 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm12782-201ENSMUST00000117519 727 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm14681-201ENSMUST00000118047 411 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm15142-201ENSMUST00000121013 856 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm22380-201ENSMUST00000157479 95 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm24875-201ENSMUST00000158888 104 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm9587-201ENSMUST00000172449 454 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm25942-201ENSMUST00000180080 110 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Mir6405-201ENSMUST00000184584 124 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm28847-201ENSMUST00000186778 700 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm29365-201ENSMUST00000189461 699 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Gm9712-201ENSMUST00000210842 311 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Olfr203-201ENSMUST00000089305 924 ntBASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Clrn3Q8BHH8 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Clrn3Q8BHH8 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm14804-201ENSMUST00000122322 508 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm24592-201ENSMUST00000122505 106 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms