Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm14647-201ENSMUST00000119392 680 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm11830-201ENSMUST00000120175 561 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm5391-201ENSMUST00000121155 613 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm19641-201ENSMUST00000188432 417 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm43510-201ENSMUST00000197922 353 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm44817-201ENSMUST00000205416 453 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm26228-201ENSMUST00000082512 107 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm25080-201ENSMUST00000082526 107 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm25793-201ENSMUST00000083287 107 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm25518-201ENSMUST00000083864 107 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.5□□□□□ -1.53
Trim56Q80VI1 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm15010-201ENSMUST00000117153 407 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm11971-201ENSMUST00000117715 288 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm11556-201ENSMUST00000120751 288 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm14500-201ENSMUST00000121647 113 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm23047-201ENSMUST00000177661 94 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm25019-201ENSMUST00000179732 110 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm27165-201ENSMUST00000183951 232 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm37586-201ENSMUST00000193654 204 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm37817-201ENSMUST00000195276 434 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm36954-201ENSMUST00000195362 363 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm44474-201ENSMUST00000196525 127 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.49□□□□□ -1.53
Trim56Q80VI1 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim56Q80VI1 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm14355-201ENSMUST00000117352 264 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm12112-201ENSMUST00000117772 231 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm14619-201ENSMUST00000120480 168 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm12872-201ENSMUST00000121835 320 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm25325-201ENSMUST00000122559 86 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm14333-201ENSMUST00000130484 264 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm24441-201ENSMUST00000157235 281 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm22177-201ENSMUST00000175002 158 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm22290-201ENSMUST00000177655 107 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm22583-201ENSMUST00000178031 107 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm27385-201ENSMUST00000184747 104 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms