Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm44923-201ENSMUST00000206673 85 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm34783-201ENSMUST00000209159 303 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm3442-201ENSMUST00000216808 710 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm17829-201ENSMUST00000219782 344 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Mir34b-201ENSMUST00000083558 84 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm23746-201ENSMUST00000104229 125 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm23133-201ENSMUST00000104255 135 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm15060-201ENSMUST00000119550 948 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm14655-201ENSMUST00000120124 578 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm15177-201ENSMUST00000120491 577 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm13356-201ENSMUST00000121678 335 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm12087-201ENSMUST00000121878 258 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm37119-201ENSMUST00000195691 389 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm43007-201ENSMUST00000197618 291 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Igkv12-49-201ENSMUST00000197714 278 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm6112-201ENSMUST00000208037 629 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm44754-201ENSMUST00000208155 400 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm19441-201ENSMUST00000221545 330 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm9762-201ENSMUST00000036976 444 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddx55Q6ZPL9 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm25563-201ENSMUST00000104603 74 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm15553-201ENSMUST00000118757 430 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm14815-201ENSMUST00000120060 488 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm16101-201ENSMUST00000160695 430 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Mir6393-201ENSMUST00000183709 94 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm27190-201ENSMUST00000184890 542 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm29484-201ENSMUST00000186067 324 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm28830-201ENSMUST00000188192 213 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm43649-201ENSMUST00000196596 391 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm8423-201ENSMUST00000211387 607 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm18120-201ENSMUST00000220079 511 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Rny3-201ENSMUST00000083011 102 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Gm23677-201ENSMUST00000083156 104 ntBASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddx55Q6ZPL9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms