Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
Col7a1Q63870 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col7a1Q63870 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Col7a1Q63870 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col7a1Q63870 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col7a1Q63870 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Col7a1Q63870 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col7a1Q63870 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col7a1Q63870 Gm13122-201ENSMUST00000118380 453 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.21□□□□□ -2.06
Col7a1Q63870 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Col7a1Q63870 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col7a1Q63870 Gm14977-201ENSMUST00000121626 812 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 Gm22257-201ENSMUST00000158687 301 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.21□□□□□ -2.06
Col7a1Q63870 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col7a1Q63870 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col7a1Q63870 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col7a1Q63870 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm22673-201ENSMUST00000104415 131 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm22192-201ENSMUST00000175128 85 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm36991-201ENSMUST00000191800 648 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm44431-201ENSMUST00000203500 413 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm25632-201ENSMUST00000083112 85 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm24261-201ENSMUST00000083744 104 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col7a1Q63870 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col7a1Q63870 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm13865-201ENSMUST00000120957 865 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.2□□□□□ -2.06
Col7a1Q63870 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col7a1Q63870 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col7a1Q63870 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm45066-201ENSMUST00000207528 2551 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Mir676-201ENSMUST00000102443 89 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm22556-201ENSMUST00000157803 100 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm37579-201ENSMUST00000194291 142 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col7a1Q63870 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col7a1Q63870 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm8744-201ENSMUST00000204475 3581 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col7a1Q63870 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm22793-201ENSMUST00000157227 330 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm28623-201ENSMUST00000187219 192 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm37684-201ENSMUST00000192779 355 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm43440-201ENSMUST00000201957 729 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col7a1Q63870 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col7a1Q63870 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm9836-201ENSMUST00000117132 216 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm14880-201ENSMUST00000117581 292 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm22859-201ENSMUST00000174978 122 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm3489-201ENSMUST00000190083 528 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Mir7682-201ENSMUST00000198467 58 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC2.18□□□□□ -2.06
Col7a1Q63870 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col7a1Q63870 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col7a1Q63870 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm17989-201ENSMUST00000211543 412 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col7a1Q63870 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC2.18□□□□□ -2.06
Col7a1Q63870 AC159256.1-201ENSMUST00000224298 1039 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms