Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm28579-201ENSMUST00000186143 369 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim28Q62318 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm37603-201ENSMUST00000192368 219 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm18340-201ENSMUST00000196342 609 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm43276-201ENSMUST00000199712 364 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm43406-201ENSMUST00000200356 334 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm44058-201ENSMUST00000204335 467 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm45162-201ENSMUST00000209013 618 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm3829-201ENSMUST00000222362 619 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim28Q62318 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim28Q62318 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim28Q62318 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm37176-201ENSMUST00000193300 4051 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm37630-201ENSMUST00000194210 1456 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Trim28Q62318 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Trim28Q62318 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm11874-201ENSMUST00000117437 130 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim28Q62318 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm23542-201ENSMUST00000158208 96 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm5929-201ENSMUST00000166883 487 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Gm9587-201ENSMUST00000172449 454 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.16□□□□□ -1.58
Trim28Q62318 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Mir8118-201ENSMUST00000183962 129 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Gm37586-201ENSMUST00000193654 204 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm44266-201ENSMUST00000205235 500 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Gm6240-201ENSMUST00000208014 473 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 CT573085.1-201ENSMUST00000224279 1197 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Mir132-201ENSMUST00000083603 66 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.16□□□□□ -1.58
Trim28Q62318 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim28Q62318 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim28Q62318 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Trim28Q62318 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Trim28Q62318 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Trim28Q62318 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Trim28Q62318 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Trim28Q62318 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm12755-201ENSMUST00000122297 282 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm22733-201ENSMUST00000158094 91 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm25436-201ENSMUST00000158275 145 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm23028-201ENSMUST00000158773 265 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm17421-201ENSMUST00000167845 674 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm25397-201ENSMUST00000176951 92 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm28191-201ENSMUST00000189112 211 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm42924-201ENSMUST00000197261 185 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Gm17987-201ENSMUST00000206902 603 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim28Q62318 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim28Q62318 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Trim28Q62318 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim28Q62318 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim28Q62318 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Trim28Q62318 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim28Q62318 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.15□□□□□ -1.59
Trim28Q62318 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim28Q62318 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim28Q62318 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim28Q62318 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Gm25833-201ENSMUST00000104137 133 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Mir669g-201ENSMUST00000116809 123 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm12880-201ENSMUST00000120652 494 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm15263-201ENSMUST00000121556 642 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms