Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm6802-202ENSMUST00000186566 126 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm28414-201ENSMUST00000190111 294 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.41□□□□□ -1.7
Ift88Q61371 Gm8023-201ENSMUST00000195298 903 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm4644-201ENSMUST00000197587 400 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.41□□□□□ -1.7
Ift88Q61371 Gm44910-201ENSMUST00000208451 396 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm45366-201ENSMUST00000209828 384 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ift88Q61371 Gm18488-201ENSMUST00000215082 364 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm31849-201ENSMUST00000220306 375 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ift88Q61371 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm25135-201ENSMUST00000082648 143 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm23097-201ENSMUST00000083448 105 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ift88Q61371 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ift88Q61371 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Ift88Q61371 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ift88Q61371 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.41□□□□□ -1.7
Ift88Q61371 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ift88Q61371 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Ift88Q61371 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.4□□□□□ -1.7
Ift88Q61371 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ift88Q61371 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ift88Q61371 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Ift88Q61371 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm25560-201ENSMUST00000104606 176 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm15180-201ENSMUST00000117745 492 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm15766-201ENSMUST00000118025 813 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm12486-201ENSMUST00000120887 541 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm13356-201ENSMUST00000121678 335 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm16327-201ENSMUST00000137146 228 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm23981-201ENSMUST00000157136 106 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm26036-201ENSMUST00000158149 144 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm15946-201ENSMUST00000160654 423 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm25194-201ENSMUST00000177987 79 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Mir7020-201ENSMUST00000183787 70 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Mir6996-201ENSMUST00000183922 61 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm27957-201ENSMUST00000184054 127 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Mir6391-201ENSMUST00000184391 104 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Mir6418-201ENSMUST00000185075 115 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm18900-201ENSMUST00000193218 584 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm45200-201ENSMUST00000207434 919 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm8423-201ENSMUST00000211387 607 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm18160-201ENSMUST00000214279 827 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm10038-201ENSMUST00000077233 441 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Ift88Q61371 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ift88Q61371 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.4□□□□□ -1.71
Ift88Q61371 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ift88Q61371 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ift88Q61371 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ift88Q61371 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.39□□□□□ -1.71
Ift88Q61371 Gm12509-201ENSMUST00000118033 609 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Gm15060-201ENSMUST00000119550 948 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Gm13574-201ENSMUST00000120482 394 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Gm14915-201ENSMUST00000120747 204 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Gm14473-201ENSMUST00000122269 557 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.39□□□□□ -1.71
Ift88Q61371 Gm23591-201ENSMUST00000157663 286 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Gm25456-201ENSMUST00000157952 109 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ift88Q61371 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.39□□□□□ -1.71
Ift88Q61371 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.39□□□□□ -1.71
Ift88Q61371 Gm29320-201ENSMUST00000185235 615 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms