Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm13973-201ENSMUST00000121371 894 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm14562-201ENSMUST00000129885 543 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm25603-201ENSMUST00000158361 105 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm24503-201ENSMUST00000158454 135 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm26866-201ENSMUST00000180414 802 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm11394-201ENSMUST00000181421 517 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm27999-201ENSMUST00000183539 193 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm37209-201ENSMUST00000194109 1276 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm18410-201ENSMUST00000207199 577 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm8942-201ENSMUST00000217892 400 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm30738-201ENSMUST00000221346 502 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm3565-201ENSMUST00000222670 609 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 AC154198.1-201ENSMUST00000222839 424 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 AC158955.1-201ENSMUST00000227140 385 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm23481-201ENSMUST00000104173 131 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm13268-201ENSMUST00000117485 433 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm2288-201ENSMUST00000118560 638 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm12543-201ENSMUST00000120410 543 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm25104-201ENSMUST00000122476 163 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm9785-202ENSMUST00000144563 593 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm25655-201ENSMUST00000158465 290 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm6155-201ENSMUST00000173735 341 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm24969-201ENSMUST00000180331 79 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm10292-201ENSMUST00000183142 581 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm28011-201ENSMUST00000184097 175 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm37698-201ENSMUST00000192605 463 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Trbv8-201ENSMUST00000194020 285 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm7751-201ENSMUST00000212868 709 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm19563-201ENSMUST00000222031 270 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 AC122448.1-201ENSMUST00000226317 772 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Mir134-201ENSMUST00000083492 71 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Snord15a-201ENSMUST00000083888 148 ntBASIC2.56□□□□□ -2
Trav3-3Q5R1C3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav3-3Q5R1C3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm6913-201ENSMUST00000100019 348 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm15151-201ENSMUST00000117106 177 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm14981-201ENSMUST00000117325 943 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm14753-201ENSMUST00000118503 246 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm15988-201ENSMUST00000118677 367 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm14282-201ENSMUST00000119484 240 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm11600-201ENSMUST00000119592 240 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm11252-201ENSMUST00000120572 939 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm16571-201ENSMUST00000159112 291 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms