Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.86
Usp28Q5I043 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.4□□□□□ -1.86
Usp28Q5I043 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Usp28Q5I043 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Usp28Q5I043 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Mir804-201ENSMUST00000103251 95 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm14825-201ENSMUST00000113538 701 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm12902-201ENSMUST00000118389 322 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm14927-201ENSMUST00000120283 454 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm15120-201ENSMUST00000120602 301 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm12723-201ENSMUST00000120700 451 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Usp28Q5I043 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm22392-201ENSMUST00000177971 107 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm27427-201ENSMUST00000185134 193 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm29104-201ENSMUST00000186304 222 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm29259-201ENSMUST00000186396 694 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm28788-201ENSMUST00000189717 375 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm29558-201ENSMUST00000190134 375 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm37219-201ENSMUST00000192036 926 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm37007-201ENSMUST00000194234 319 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm25203-202ENSMUST00000200458 216 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm18704-201ENSMUST00000219736 446 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm9845-201ENSMUST00000056409 598 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm25203-201ENSMUST00000082842 215 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Usp28Q5I043 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm6274-201ENSMUST00000118173 797 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm15854-201ENSMUST00000118879 808 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm23205-201ENSMUST00000158671 103 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm43746-201ENSMUST00000200028 317 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.39□□□□□ -1.87
Usp28Q5I043 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm7407-201ENSMUST00000208301 568 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm19599-201ENSMUST00000218898 358 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm6841-201ENSMUST00000220602 598 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Usp28Q5I043 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.39□□□□□ -1.87
Usp28Q5I043 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Usp28Q5I043 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp28Q5I043 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usp28Q5I043 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm24544-201ENSMUST00000103862 110 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm5384-201ENSMUST00000120313 463 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm22187-201ENSMUST00000157819 129 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm9890-201ENSMUST00000171867 537 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm26297-201ENSMUST00000179464 132 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Mir7028-201ENSMUST00000185016 64 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm43384-201ENSMUST00000200569 637 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms