Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm23532-201ENSMUST00000104569 112 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm14007-201ENSMUST00000118288 210 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm23167-201ENSMUST00000157155 103 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm23317-201ENSMUST00000157999 129 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21241-201ENSMUST00000179551 934 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm28552-201ENSMUST00000190725 388 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm20819-201ENSMUST00000191091 925 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm20871-201ENSMUST00000191322 931 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm37416-201ENSMUST00000193596 318 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm8790-201ENSMUST00000194108 322 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm42857-201ENSMUST00000200823 339 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm44727-201ENSMUST00000204225 451 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm18016-201ENSMUST00000216119 801 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm24611-201ENSMUST00000083272 107 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Mir463-201ENSMUST00000093570 75 ntBASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim40Q3UWA4 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm12584-201ENSMUST00000117109 1105 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm7974-201ENSMUST00000117154 408 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm14253-201ENSMUST00000122112 639 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm11403-201ENSMUST00000122195 369 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm25438-201ENSMUST00000158281 110 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm22530-201ENSMUST00000158820 118 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm17085-201ENSMUST00000165425 502 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm25534-201ENSMUST00000175365 125 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm21894-201ENSMUST00000179631 546 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm27428-201ENSMUST00000184289 110 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm28304-201ENSMUST00000185977 312 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm29256-201ENSMUST00000189094 312 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm28484-201ENSMUST00000190606 312 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm20915-201ENSMUST00000191575 663 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm44354-201ENSMUST00000196017 143 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm18602-201ENSMUST00000209794 851 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm45530-201ENSMUST00000211658 225 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm3829-201ENSMUST00000222362 619 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm25481-201ENSMUST00000083221 158 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm22293-201ENSMUST00000083314 109 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm10212-201ENSMUST00000087884 324 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim40Q3UWA4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms