Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm43228-201ENSMUST00000200735 264 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm18540-201ENSMUST00000204025 526 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm24715-201ENSMUST00000102377 95 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Mir1192-201ENSMUST00000116976 121 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm9157-201ENSMUST00000117673 225 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm14975-201ENSMUST00000118741 664 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm15060-201ENSMUST00000119550 948 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm12739-201ENSMUST00000119769 382 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm5384-201ENSMUST00000120313 463 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm25835-201ENSMUST00000158917 144 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm24819-201ENSMUST00000175094 166 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm23152-201ENSMUST00000175322 116 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm37438-201ENSMUST00000192813 393 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm32381-201ENSMUST00000203192 476 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Snord35b-201ENSMUST00000082833 87 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.37□□□□□ -1.87
Trafd1Q3UDK1 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm22590-201ENSMUST00000104247 128 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm14050-201ENSMUST00000117052 346 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm11898-201ENSMUST00000117161 385 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm12568-201ENSMUST00000117362 624 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm13379-201ENSMUST00000118053 621 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm11896-201ENSMUST00000121105 820 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm11260-201ENSMUST00000121163 942 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm22380-201ENSMUST00000157479 95 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm25860-201ENSMUST00000158252 126 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm10075-201ENSMUST00000162030 545 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm9890-201ENSMUST00000171867 537 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm27733-201ENSMUST00000184803 68 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm37104-201ENSMUST00000193278 196 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms