Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm14125-201ENSMUST00000113442 680 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm11408-201ENSMUST00000117889 519 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm14918-201ENSMUST00000118153 268 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Zfp389-201ENSMUST00000118425 675 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm14517-201ENSMUST00000119040 337 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm11631-201ENSMUST00000119220 156 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm16017-201ENSMUST00000119834 208 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm12691-201ENSMUST00000120186 456 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm12543-201ENSMUST00000120410 543 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm26490-201ENSMUST00000157879 140 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm25334-201ENSMUST00000158036 110 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Cfap61-214ENSMUST00000167179 183 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm21827-201ENSMUST00000178247 423 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Mir6541-201ENSMUST00000183649 110 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm27676-201ENSMUST00000183669 61 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm17946-201ENSMUST00000186856 538 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm28628-201ENSMUST00000187006 264 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm17966-201ENSMUST00000193453 594 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm43424-201ENSMUST00000200484 253 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm29754-201ENSMUST00000206269 358 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm9712-201ENSMUST00000210842 311 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm14530-201ENSMUST00000122391 333 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm6265-201ENSMUST00000149263 231 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm16101-201ENSMUST00000160695 430 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm8224-201ENSMUST00000166178 497 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Mir3092-201ENSMUST00000174954 96 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm10067-201ENSMUST00000179462 348 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm29556-201ENSMUST00000187591 696 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm37492-201ENSMUST00000191948 376 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm44465-201ENSMUST00000199536 114 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm44726-201ENSMUST00000203427 217 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm45553-201ENSMUST00000209929 507 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm19219-201ENSMUST00000215863 724 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf180Q3U827 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm23460-201ENSMUST00000083258 109 ntBASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf180Q3U827 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm25595-201ENSMUST00000102273 97 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm16431-201ENSMUST00000117454 431 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm14831-201ENSMUST00000120253 409 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm14605-201ENSMUST00000120599 268 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm6591-201ENSMUST00000121063 434 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm12819-201ENSMUST00000122223 629 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm23118-201ENSMUST00000122657 187 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm24138-201ENSMUST00000157572 114 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms