Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm24385-201ENSMUST00000122694 350 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm22084-201ENSMUST00000157585 105 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm4222-201ENSMUST00000165784 470 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm25397-201ENSMUST00000176951 92 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm42594-201ENSMUST00000199511 246 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm4734-201ENSMUST00000200117 777 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm44371-201ENSMUST00000204148 467 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm45317-201ENSMUST00000210385 223 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Olfr936-202ENSMUST00000216912 937 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm8681-201ENSMUST00000219115 618 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm5176-202ENSMUST00000220267 583 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm9616-201ENSMUST00000221154 781 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Olfr197-201ENSMUST00000080031 926 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.01□□□□□ -1.77
Col28a1Q2UY11 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm23226-201ENSMUST00000116927 103 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm14677-201ENSMUST00000117866 486 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm14918-201ENSMUST00000118153 268 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm5287-201ENSMUST00000120666 598 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm14678-201ENSMUST00000121396 482 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm25806-201ENSMUST00000122782 122 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm23028-201ENSMUST00000158773 265 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm24875-201ENSMUST00000158888 104 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm17109-201ENSMUST00000163985 358 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm27013-201ENSMUST00000182441 1024 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm8132-201ENSMUST00000204938 640 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm17737-201ENSMUST00000210183 1147 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4□□□□□ -1.77
Col28a1Q2UY11 AC122465.3-201ENSMUST00000221644 355 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4□□□□□ -1.77
Col28a1Q2UY11 AC138667.2-201ENSMUST00000224880 598 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm25079-201ENSMUST00000082529 203 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Snord14e-201ENSMUST00000082857 90 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm24043-201ENSMUST00000083108 116 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm37478-201ENSMUST00000193624 3495 ntBASIC4□□□□□ -1.77
Col28a1Q2UY11 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col28a1Q2UY11 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col28a1Q2UY11 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col28a1Q2UY11 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms