Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox1P53783 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox1P53783 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox1P53783 Gm10048-201ENSMUST00000194196 372 ntBASIC5.17□□□□□ -1.58
Sox1P53783 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox1P53783 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.17□□□□□ -1.58
Sox1P53783 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox1P53783 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.17□□□□□ -1.58
Sox1P53783 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox1P53783 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox1P53783 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.17□□□□□ -1.58
Sox1P53783 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox1P53783 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox1P53783 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox1P53783 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox1P53783 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox1P53783 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox1P53783 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox1P53783 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Gm22473-201ENSMUST00000104114 132 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm23593-201ENSMUST00000104309 120 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm26146-201ENSMUST00000104478 185 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Gm14706-201ENSMUST00000117744 255 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm8430-201ENSMUST00000119780 471 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm3788-201ENSMUST00000119949 136 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm14977-201ENSMUST00000121626 812 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm23463-201ENSMUST00000122468 99 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.16□□□□□ -1.58
Sox1P53783 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Gm25643-201ENSMUST00000158874 103 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm7953-201ENSMUST00000168278 469 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm23864-201ENSMUST00000177607 107 ntBASIC5.16□□□□□ -1.58
Sox1P53783 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Mir6412-201ENSMUST00000184477 97 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm5285-201ENSMUST00000193089 666 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm44419-201ENSMUST00000203338 229 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm45616-201ENSMUST00000211711 319 ntBASIC5.16□□□□□ -1.58
Sox1P53783 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.16□□□□□ -1.58
Sox1P53783 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm46389-201ENSMUST00000223199 392 ntBASIC5.16□□□□□ -1.58
Sox1P53783 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.16□□□□□ -1.58
Sox1P53783 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm6104-201ENSMUST00000078030 603 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm26225-201ENSMUST00000082508 135 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm23451-201ENSMUST00000083328 122 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox1P53783 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.16□□□□□ -1.58
Sox1P53783 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox1P53783 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Sox1P53783 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox1P53783 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Sox1P53783 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox1P53783 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.15□□□□□ -1.58
Sox1P53783 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.15□□□□□ -1.58
Sox1P53783 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox1P53783 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox1P53783 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sox1P53783 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 Gm14067-201ENSMUST00000119340 314 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm15112-201ENSMUST00000120152 860 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.15□□□□□ -1.59
Sox1P53783 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm22718-201ENSMUST00000122701 315 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm22037-201ENSMUST00000157280 296 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm24060-201ENSMUST00000157494 95 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm23258-201ENSMUST00000158319 106 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sox1P53783 Gm24818-201ENSMUST00000175093 161 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Mir7022-201ENSMUST00000183749 61 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms