Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox18P43680 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox18P43680 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox18P43680 Gm3851-201ENSMUST00000168653 318 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox18P43680 Gm24264-201ENSMUST00000179835 94 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.48□□□□□ -1.53
Sox18P43680 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox18P43680 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox18P43680 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox18P43680 Gm28552-201ENSMUST00000190725 388 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Gm36946-201ENSMUST00000192706 435 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Gm44391-201ENSMUST00000198490 93 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Gm44259-201ENSMUST00000204996 298 ntBASIC5.48□□□□□ -1.53
Sox18P43680 AC159896.1-201ENSMUST00000215264 215 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Gm18188-201ENSMUST00000219386 478 ntBASIC5.48□□□□□ -1.53
Sox18P43680 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.48□□□□□ -1.53
Sox18P43680 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.48□□□□□ -1.53
Sox18P43680 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox18P43680 Snord82-201ENSMUST00000082889 70 ntBASIC5.48□□□□□ -1.53
Sox18P43680 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.48□□□□□ -1.53
Sox18P43680 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox18P43680 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Sox18P43680 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox18P43680 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox18P43680 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.48□□□□□ -1.53
Sox18P43680 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox18P43680 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox18P43680 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.48□□□□□ -1.53
Sox18P43680 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox18P43680 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox18P43680 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Sox18P43680 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Gm24578-201ENSMUST00000103970 129 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm24671-201ENSMUST00000104159 158 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm24160-201ENSMUST00000104594 126 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm12112-201ENSMUST00000117772 231 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm12094-201ENSMUST00000121781 472 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm5958-201ENSMUST00000147698 297 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm25599-201ENSMUST00000157816 103 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm33952-201ENSMUST00000197795 408 ntBASIC5.47□□□□□ -1.53
Sox18P43680 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm36189-201ENSMUST00000204113 523 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm18470-201ENSMUST00000207467 420 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm18464-201ENSMUST00000207803 420 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm18461-201ENSMUST00000208421 420 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm3816-201ENSMUST00000209803 433 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Supt4b-201ENSMUST00000214434 351 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox18P43680 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox18P43680 Gm5321-201ENSMUST00000072050 447 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Mir181b-2-201ENSMUST00000083644 89 ntBASIC5.47□□□□□ -1.53
Sox18P43680 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox18P43680 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox18P43680 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox18P43680 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sox18P43680 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.46□□□□□ -1.53
Sox18P43680 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sox18P43680 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.46□□□□□ -1.53
Sox18P43680 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox18P43680 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox18P43680 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.46□□□□□ -1.53
Sox18P43680 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox18P43680 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox18P43680 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox18P43680 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox18P43680 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox18P43680 Gm25938-201ENSMUST00000104139 166 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox18P43680 Gm15151-201ENSMUST00000117106 177 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm6274-201ENSMUST00000118173 797 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm7927-201ENSMUST00000118818 880 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm13541-201ENSMUST00000119519 283 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm15244-201ENSMUST00000121122 130 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm14977-201ENSMUST00000121626 812 ntBASIC5.46□□□□□ -1.54
Sox18P43680 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm23327-201ENSMUST00000157420 78 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm23312-201ENSMUST00000158774 102 ntBASIC5.46□□□□□ -1.54
Sox18P43680 Gm20534-201ENSMUST00000172957 172 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms