Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm12311-201ENSMUST00000118803 374 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm13082-201ENSMUST00000118877 561 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm12053-201ENSMUST00000119022 252 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm12466-201ENSMUST00000121199 620 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm13973-201ENSMUST00000121371 894 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.85□□□□□ -1.63
Usp4P35123 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.85□□□□□ -1.63
Usp4P35123 Gm14364-201ENSMUST00000129209 267 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm8121-201ENSMUST00000153583 499 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.85□□□□□ -1.63
Usp4P35123 Gm24441-201ENSMUST00000157235 281 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm25555-201ENSMUST00000158078 111 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Mir6382-201ENSMUST00000184055 110 ntBASIC4.85□□□□□ -1.63
Usp4P35123 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp4P35123 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Npn2-202ENSMUST00000189275 235 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm18403-201ENSMUST00000192907 529 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm37881-201ENSMUST00000193001 421 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm44468-201ENSMUST00000199516 105 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.85□□□□□ -1.63
Usp4P35123 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.85□□□□□ -1.63
Usp4P35123 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.85□□□□□ -1.63
Usp4P35123 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.85□□□□□ -1.63
Usp4P35123 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.85□□□□□ -1.63
Usp4P35123 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.85□□□□□ -1.63
Usp4P35123 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.85□□□□□ -1.63
Usp4P35123 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Usp4P35123 Gm24460-201ENSMUST00000082731 106 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Mir215-201ENSMUST00000083628 112 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Usp4P35123 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Usp4P35123 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Usp4P35123 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Usp4P35123 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.84□□□□□ -1.63
Usp4P35123 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Usp4P35123 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Usp4P35123 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.84□□□□□ -1.63
Usp4P35123 Gm25111-201ENSMUST00000116686 147 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm11633-201ENSMUST00000118176 444 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm11784-201ENSMUST00000118568 474 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm11584-201ENSMUST00000120636 325 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm5391-201ENSMUST00000121155 613 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm14638-201ENSMUST00000121338 216 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.84□□□□□ -1.63
Usp4P35123 Gm24188-201ENSMUST00000157980 108 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm22726-201ENSMUST00000158089 179 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Mir1947-201ENSMUST00000158235 85 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm23068-201ENSMUST00000158239 293 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm16545-201ENSMUST00000161968 463 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm22851-201ENSMUST00000178741 94 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Usp4P35123 Gm29045-201ENSMUST00000187278 698 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm28098-201ENSMUST00000191361 699 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm20056-201ENSMUST00000194813 519 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.84□□□□□ -1.63
Usp4P35123 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Usp4P35123 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Usp4P35123 Gm18100-201ENSMUST00000200897 452 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm3816-201ENSMUST00000209803 433 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Gm45344-201ENSMUST00000211610 341 ntBASIC4.84□□□□□ -1.63
Usp4P35123 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Usp4P35123 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.84□□□□□ -1.63
Usp4P35123 Gm7753-201ENSMUST00000221007 867 ntBASIC4.84□□□□□ -1.63
Usp4P35123 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.84□□□□□ -1.63
Usp4P35123 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.84□□□□□ -1.63
Usp4P35123 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.84□□□□□ -1.63
Usp4P35123 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Usp4P35123 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Usp4P35123 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Usp4P35123 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Usp4P35123 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.84□□□□□ -1.64
Usp4P35123 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Usp4P35123 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.84□□□□□ -1.64
Usp4P35123 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Usp4P35123 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Usp4P35123 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Usp4P35123 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Usp4P35123 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm15231-201ENSMUST00000119174 447 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm15267-201ENSMUST00000120888 464 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm22208-201ENSMUST00000122658 110 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp4P35123 Gm25278-201ENSMUST00000157267 120 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm24419-201ENSMUST00000157875 332 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.83□□□□□ -1.64
Usp4P35123 Gm8747-201ENSMUST00000195392 751 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm44373-201ENSMUST00000196112 169 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Gm43975-201ENSMUST00000203023 481 ntBASIC4.83□□□□□ -1.64
Usp4P35123 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Usp4P35123 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Usp4P35123 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp4P35123 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms