Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm23229-201ENSMUST00000157297 105 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm24291-201ENSMUST00000157633 162 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm24690-201ENSMUST00000157759 97 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm25553-201ENSMUST00000158076 79 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm24876-201ENSMUST00000158780 92 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm19203-201ENSMUST00000174049 939 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Snord93-201ENSMUST00000175580 71 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Col2a1P28481 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col2a1P28481 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col2a1P28481 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm11456-201ENSMUST00000121070 256 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col2a1P28481 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm22961-201ENSMUST00000157964 106 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm24879-201ENSMUST00000158386 143 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm25528-201ENSMUST00000180264 132 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Mir7242-201ENSMUST00000183710 79 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Mir6418-201ENSMUST00000185075 115 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm44387-201ENSMUST00000196298 145 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm44623-201ENSMUST00000207934 434 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm18242-201ENSMUST00000218455 542 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm7540-201ENSMUST00000219764 926 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col2a1P28481 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col2a1P28481 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm10025-201ENSMUST00000079568 372 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col2a1P28481 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm24273-201ENSMUST00000102332 164 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm12617-201ENSMUST00000121268 381 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm15279-201ENSMUST00000155593 288 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm22099-201ENSMUST00000157925 123 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm23963-201ENSMUST00000179603 77 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm21742-201ENSMUST00000189352 548 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm19620-201ENSMUST00000195972 434 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm43655-201ENSMUST00000197367 222 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm18747-201ENSMUST00000198129 648 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm44332-201ENSMUST00000203712 433 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm46234-201ENSMUST00000218702 259 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.28□□□□□ -1.88
Col2a1P28481 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col2a1P28481 Gm25099-201ENSMUST00000093716 116 ntBASIC3.28□□□□□ -1.88
Col2a1P28481 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.28□□□□□ -1.89
Col2a1P28481 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col2a1P28481 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col2a1P28481 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm22543-201ENSMUST00000104347 94 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm25500-201ENSMUST00000104426 123 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm12757-201ENSMUST00000119465 800 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm15103-201ENSMUST00000119893 871 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm15719-201ENSMUST00000120619 635 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm25109-201ENSMUST00000122474 114 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm2427-201ENSMUST00000189121 881 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm2979-201ENSMUST00000193442 463 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Gm5655-201ENSMUST00000221078 901 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col2a1P28481 Gm22970-201ENSMUST00000083304 186 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.27□□□□□ -1.89
Col2a1P28481 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Col2a1P28481 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.26□□□□□ -1.89
Col2a1P28481 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col2a1P28481 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col2a1P28481 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.26□□□□□ -1.89
Col2a1P28481 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col2a1P28481 Gm24122-201ENSMUST00000104107 132 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Gm9427-201ENSMUST00000116187 651 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Gm15267-201ENSMUST00000120888 464 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Gm7327-201ENSMUST00000120925 652 ntBASIC3.26□□□□□ -1.89
Col2a1P28481 Gm3757-201ENSMUST00000125878 675 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms